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L1_008_000M1_scaffold_1512

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1512_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..423)
DNA (423bp) protein (141aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Ketol-acid reductoisomerase n=7 Tax=Bifidobacterium bifidum RepID=E3ELJ5_BIFBS
ilvC1; ketol-acid reductoisomerase
L1_008_000M1_scaffold_1512_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(669..2039)
DNA (1371bp) protein (457aa)
Transporter, MFS superfamily n=2 Tax=Bifidobacterium bifidum RepID=E4NYI2_BIFBP
MFS superfamily transporter
Transporter, MFS superfamily {ECO:0000313|EMBL:KFI42262.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L1_008_000M1_scaffold_1512_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2629..4314)
DNA (1686bp) protein (562aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DW51_BIFBI
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI84056.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97361.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
putative transmembrane protein
L1_008_000M1_scaffold_1512_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4365..4796)
DNA (432bp) protein (144aa)
Sucrose phosphorylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELJ2_BIFBS
scrP; sucrose phosphorylase
Sucrose phosphorylase {ECO:0000313|EMBL:ADO52387.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_1512_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4879..5925)
DNA (1047bp) protein (349aa)
LacI family transcriptional regulator, putative sucrose operon repressor n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELJ1_BIFBS
LacI family sucrose operon transcriptional repressor
LacI family transcriptional regulator, putative sucrose operon repressor {ECO:0000313|EMBL:ADO52386.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_1512_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6083..6451)
DNA (369bp) protein (123aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7B0_BIFBI
crcB2; camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_1512_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6453..7397)
DNA (945bp) protein (315aa)
Putative fluoride ion transporter CrcB n=2 Tax=Bifidobacterium bifidum RepID=E3ELI9_BIFBS
crcB1; camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_1512_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7472..8758)
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Adenylosuccinate synthetase n=4 Tax=Bifidobacterium bifidum RepID=E3ELI8_BIFBS
L1_008_000M1_scaffold_1512_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9048..10115)
DNA (1068bp) protein (356aa)
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:EFR49513.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EFR49513.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
fbaA; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase, class II n=3 Tax=Bifidobacterium bifidum RepID=E4V7A6_BIFBI
L1_008_000M1_scaffold_1512_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10254..11549
DNA (1296bp) protein (432aa)
Polysaccharide deacetylase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GBJ3_9BIFI
Polysaccharide deacetylase {ECO:0000313|EMBL:CDB22813.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_1512_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11726..12865)
DNA (1140bp) protein (380aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9Y7_BIFLI
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEQ54831.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
phage integrase
L1_008_000M1_scaffold_1512_12
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12943..13920
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Gardnerella vaginalis RepID=S4GD93_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI42301.1}; TaxID=1261070 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8481B.;"
L1_008_000M1_scaffold_1512_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14050..14526)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Lactococcus lactis subsp. cremoris RepID=T0UDT1_LACLC
Phage protein
Phage protein {ECO:0000313|EMBL:AJE06516.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1512_14
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14540..14932)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCL5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI92475.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
hypothetical protein
L1_008_000M1_scaffold_1512_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14940..15317)
DNA (378bp) protein (126aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3AUW0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ24997.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L1_008_000M1_scaffold_1512_16
unknown

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15421..15585
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000M1_scaffold_1512_17
unknown

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15617..15856
DNA (240bp) protein (80aa)
hypothetical protein
L1_008_000M1_scaffold_1512_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15856..16059
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XYC1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV34305.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_008_000M1_scaffold_1512_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16059..16265
DNA (207bp) protein (69aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31599.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L1_008_000M1_scaffold_1512_20
unknown

Not on your lists

16252..16599
DNA (348bp) protein (116aa)

This feature has no annotations

L1_008_000M1_scaffold_1512_21
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16930..17169
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI92469.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
L1_008_000M1_scaffold_1512_22
unknown

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17166..17582
DNA (417bp) protein (139aa)

This feature has no annotations

L1_008_000M1_scaffold_1512_23
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17579..18571
DNA (993bp) protein (331aa)
YqaJ viral recombinase family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRU2_BIFBR
Phage-type endonuclease family protein {ECO:0000313|EMBL:KFI86243.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Phage-related protein
L1_008_000M1_scaffold_1512_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18579..18992
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19262.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_000M1_scaffold_1512_25
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18992..20065
DNA (1074bp) protein (358aa)
Recombinase, phage RecT family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRU3_BIFBR
DNA binding, phage related protein {ECO:0000313|EMBL:KFI92466.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Recombinational DNA repair protein RecT
L1_008_000M1_scaffold_1512_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20068..20517
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY33071.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_000M1_scaffold_1512_27
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20519..20665
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRU6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:KFI92464.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
L1_008_000M1_scaffold_1512_28
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20655..21281
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI92463.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
hypothetical protein
L1_008_000M1_scaffold_1512_29
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21274..21762
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Parascardovia denticolens IPLA 20019 RepID=I8UL13_PARDN
Phage protein {ECO:0000313|EMBL:KFI57454.1}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
hypothetical protein
L1_008_000M1_scaffold_1512_30
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21833..22312
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTW7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI86237.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
hypothetical protein
Displaying items 1-30 of 61 in total

View Taxonomy