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L1_008_000M1_scaffold_1561

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1561_31
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30821..31573)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32694.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_32
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31570..32763)
DNA (1194bp) protein (398aa)
Type II secretion system protein E n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSF1_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:CCY32693.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
pilus assembly protein CpaF
L1_008_000M1_scaffold_1561_33
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32760..33773)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32692.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_34
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33770..34279)
DNA (510bp) protein (170aa)
Type IV leader peptidase family. (EC:3.4.23.43)
Type IV leader peptidase family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7E5_9FIRM
Type IV leader peptidase family {ECO:0000313|EMBL:CCY32691.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_008_000M1_scaffold_1561_35
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34555..35175
DNA (621bp) protein (207aa)
Lipase/acylhydrolase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSH6_9FIRM
Lipase/acylhydrolase {ECO:0000313|EMBL:CCY32690.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Lysophospholipase L1 and related esterases
L1_008_000M1_scaffold_1561_36
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35335..36090
DNA (756bp) protein (252aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX16_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY32689.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Acetyltransferases
L1_008_000M1_scaffold_1561_37
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36301..36861)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32688.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Protein of unknown function (DUF1393).
L1_008_000M1_scaffold_1561_38
unknown

Not on your lists

comp(36884..37033)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000M1_scaffold_1561_39
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37239..37463
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32687.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_008_000M1_scaffold_1561_40
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37460..38617
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32686.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_41
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38598..39473)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32685.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Imidazolonepropionase and related amidohydrolases
L1_008_000M1_scaffold_1561_42
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39788..40942)
DNA (1155bp) protein (385aa)
Alanyl-tRNA synthetase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX12_9FIRM
Alanyl-tRNA synthetase {ECO:0000313|EMBL:CCY32684.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Alanyl-tRNA synthetase
L1_008_000M1_scaffold_1561_43
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41849..42343
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32683.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_44
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42345..43112
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32682.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_45
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43181..44161)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-(Acetyl-CoA carboxylase) ligase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7D7_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_008_000M1_scaffold_1561_46
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44166..45155)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97293.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1561_47
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45166..45423)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32658.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_48
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45709..46401)
DNA (693bp) protein (231aa)
LrgB family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6N8_9FIRM
LrgB family protein {ECO:0000313|EMBL:CCY32657.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
LrgB family protein
L1_008_000M1_scaffold_1561_49
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46398..46760)
DNA (363bp) protein (121aa)
LrgA family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7B7_9FIRM
LrgA family protein {ECO:0000313|EMBL:CCY32656.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Putative effector of murein hydrolase LrgA
L1_008_000M1_scaffold_1561_50
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46757..47233)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32655.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_51
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47403..47912)
DNA (510bp) protein (170aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Phosphoesterase MJ0936 family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWZ1_9FIRM
phosphoesterase, MJ0936 family
L1_008_000M1_scaffold_1561_52
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47925..49151)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32653.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_1561_53
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49245..50243)
DNA (999bp) protein (333aa)
celA; cellulase CelA (EC:3.2.1.4)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT25516.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L1_008_000M1_scaffold_1561_54
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50243..50758)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32652.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted metal-dependent hydrolase
Displaying items 31-54 of 54 in total

View Taxonomy