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L1_008_000M1_scaffold_22

Search features with annotation key words

Displaying items 91-120 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_22_91
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

90005..90517
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28446.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_22_92
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

90667..90897
DNA (231bp) protein (77aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFX4_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CCY28448.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative HTH-type transcriptional regulator
L1_008_000M1_scaffold_22_93
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

90924..91349
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28449.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_22_94
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

91365..91796
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28451.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_22_95
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

91814..92104
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28453.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_22_96
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

92123..92485
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HK04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28454.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_22_97
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(92543..93748)
DNA (1206bp) protein (402aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVB4_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:CCY28456.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_22_98
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

93986..94597
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFY3_9FIRM
L1_008_000M1_scaffold_22_99
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(94663..95202)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28460.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
immunoglobulin-binding regulator B
L1_008_000M1_scaffold_22_100
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(95192..96526)
DNA (1335bp) protein (445aa)
Co-activator of prophage protein expression IbrA n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUK4_9FIRM
Co-activator of prophage protein expression IbrA {ECO:0000313|EMBL:CCY28462.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Co-activator of prophage gene expression IbrA
L1_008_000M1_scaffold_22_101
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

96883..97053
DNA (171bp) protein (57aa)
Site-specific DNA recombinase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITE5_9FIRM
Site-specific DNA recombinase {ECO:0000313|EMBL:CCY43609.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_22_102
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(97037..97975)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XYS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD11382.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Domain of unknown function (DUF1848).
L1_008_000M1_scaffold_22_103
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(97979..98875)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5R0U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ28201.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
L1_008_000M1_scaffold_22_104
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99063..99686)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=G5F873_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07390.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
restriction endonuclease R.NgoMIII
L1_008_000M1_scaffold_22_105
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(99686..100870)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AT44_9FIRM
Site-specific DNA methylase
Site-specific DNA methylase {ECO:0000313|EMBL:AFC63732.1}; TaxID=1155766 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (strain Aus0004).;"
L1_008_000M1_scaffold_22_106
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100860..101294)
DNA (435bp) protein (145aa)
Fis family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000363E0E6
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
L1_008_000M1_scaffold_22_107
unknown

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comp(101284..101433)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000M1_scaffold_22_108
unknown

Not on your lists

101465..101695
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_000M1_scaffold_22_109
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

101804..102124
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44527.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L1_008_000M1_scaffold_22_110
unknown

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102277..102582
DNA (306bp) protein (102aa)

This feature has no annotations

L1_008_000M1_scaffold_22_111
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102628..103428)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63725.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
RNA polymerase sigma-32 subunit RpoH
L1_008_000M1_scaffold_22_112
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103370..104704)
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63726.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_22_113
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

104868..105941
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D506_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75268.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L1_008_000M1_scaffold_22_114
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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106144..106455
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00388.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_22_115
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106522..107814
DNA (1293bp) protein (431aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU39_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDN00386.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Relaxase/mobilization nuclease family protein
L1_008_000M1_scaffold_22_116
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

107829..108026
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00385.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_008_000M1_scaffold_22_117
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108145..109743
DNA (1599bp) protein (533aa)
Resolvase protein n=2 Tax=Oscillibacter RepID=U2QEA2_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERK62559.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative recombinase
L1_008_000M1_scaffold_22_118
unknown

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comp(109931..110350)
DNA (420bp) protein (140aa)

This feature has no annotations

L1_008_000M1_scaffold_22_119
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(110501..112078)
DNA (1578bp) protein (526aa)
Resolvase domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IZS7_9FIRM
Resolvase domain protein {ECO:0000313|EMBL:CDB43447.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
resolvase domain-containing protein
L1_008_000M1_scaffold_22_120
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(112246..113379)
DNA (1134bp) protein (378aa)
Resolvase domain n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDJ3_9FIRM
Resolvase domain {ECO:0000313|EMBL:CDB43446.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Resolvase domain
Displaying items 91-120 of 225 in total

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