ggKbase home page

L1_008_000M1_scaffold_95

Search features with annotation key words

Displaying items 61-90 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_95_61
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(49618..50154)
DNA (537bp) protein (179aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Ribonuclease M5 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5B1_9FIRM
primase-like protein
L1_008_000M1_scaffold_95_62
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(50159..51184)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QAK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23379.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_95_63
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

51506..51907
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23377.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_95_64
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(51938..56167)
DNA (4230bp) protein (1410aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4P4_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EDS74073.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
activator of (R)-2-hydroxyglutaryl-coA dehydratase
L1_008_000M1_scaffold_95_65
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(56160..56597)
DNA (438bp) protein (146aa)
Transcriptional regulator MarR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q980_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ25088.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
MarR family transcriptional regulator
L1_008_000M1_scaffold_95_66
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(56704..57345)
DNA (642bp) protein (214aa)
Pyridoxal phosphate enzyme, YggS family n=5 Tax=Erysipelotrichaceae RepID=B0N1X9_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHQ45667.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
alanine racemase
L1_008_000M1_scaffold_95_67
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(57411..57947)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23756.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ECF-type riboflavin transporter, S component
L1_008_000M1_scaffold_95_68
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(57956..58735)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23757.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_95_69
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(58719..59804)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23758.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_95_70
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(60166..62127)
DNA (1962bp) protein (654aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBQ7_9FIRM
L1_008_000M1_scaffold_95_71
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(62464..63807)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23760.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_95_72
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(63901..64749)
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNI4_9FIRM
16S rRNA methyltransferase
L1_008_000M1_scaffold_95_73
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(64742..65479)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23762.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
methyltransferase small
L1_008_000M1_scaffold_95_74
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(65457..66299)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23763.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_95_75
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(66312..67256)
DNA (945bp) protein (315aa)
dnaX_1; DNA polymerase III subunit tau (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23764.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_95_76
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(67253..67873)
DNA (621bp) protein (207aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Thymidylate kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4Q2_9FIRM
thymidylate kinase
L1_008_000M1_scaffold_95_77
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(67948..68538)
DNA (591bp) protein (197aa)
Recombination protein RecR n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNJ0_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
recR; recombination protein RecR
L1_008_000M1_scaffold_95_78
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(68548..70350)
DNA (1803bp) protein (601aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRY9_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCZ23767.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_95_79
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(70401..70853)
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5E6_9FIRM
CMP/dCMP deaminase zinc-binding protein
L1_008_000M1_scaffold_95_80
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(70984..71490)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23769.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
GNAT family acetyltransferase
L1_008_000M1_scaffold_95_81
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(71531..72817)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4Q7_9FIRM
Serine-tRNA ligase {ECO:0000313|EMBL:CCZ23770.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_95_82
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(72866..73231)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23771.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_95_83
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(73248..75716)
DNA (2469bp) protein (823aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
gyrA; DNA gyrase, A subunit (EC:5.99.1.3)
DNA gyrase subunit A n=4 Tax=Erysipelotrichaceae RepID=B0N229_9FIRM
L1_008_000M1_scaffold_95_84
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(75729..77660)
DNA (1932bp) protein (644aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DNA gyrase subunit B n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5F0_9FIRM
gyrB; DNA gyrase subunit B
L1_008_000M1_scaffold_95_85
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(77657..78745)
DNA (1089bp) protein (363aa)
DNA replication and repair protein RecF n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBS3_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
recombinase RecF
L1_008_000M1_scaffold_95_86
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(78732..78947)
DNA (216bp) protein (72aa)
S4 domain-containing protein YaaA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4R4_9FIRM
S4 domain-containing protein YaaA {ECO:0000313|EMBL:CCZ23775.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_95_87
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(79147..80256)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNJ9_9FIRM
L1_008_000M1_scaffold_95_88
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(80400..81731)
DNA (1332bp) protein (444aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRZ9_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dnaA; chromosomal replication initiator protein DnaA
L1_008_000M1_scaffold_95_89
unknown

Not on your lists

82444..82602
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000M1_scaffold_95_90
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


82755..82889
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5F4_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
50S ribosomal protein L34
Displaying items 61-90 of 119 in total

View Taxonomy