ggKbase home page

L1_008_000M1_scaffold_133

Search features with annotation key words

Displaying items 31-60 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_133_31
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37900..39336
DNA (1437bp) protein (479aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QKS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18367.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_133_32
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39338..40876
DNA (1539bp) protein (513aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=4 Tax=Clostridiales RepID=F3AXD3_9FIRM
L1_008_000M1_scaffold_133_33
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40833..41360
DNA (528bp) protein (176aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=3 Tax=Clostridiales RepID=F3AXD2_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCZ26936.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_133_34
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41376..43217
DNA (1842bp) protein (614aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridiales RepID=R5R1Q5_9FIRM
ATP-dependent metalloprotease FtsH
L1_008_000M1_scaffold_133_35
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43221..45287
DNA (2067bp) protein (689aa)
Glycosidases (EC:3.2.1.20)
Alpha amylase, catalytic domain protein n=5 Tax=Clostridiales RepID=A5KMK0_9FIRM
Amylopullulanase {ECO:0000313|EMBL:EFV18363.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_133_36
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45272..46204
DNA (933bp) protein (311aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Putative pyridoxal kinase n=2 Tax=Lachnospiraceae RepID=A5KMK1_9FIRM
pyridoxal kinase
L1_008_000M1_scaffold_133_37
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46376..52897
DNA (6522bp) protein (2174aa)
Fibro-slime domain protein n=2 Tax=root RepID=A5KMK2_9FIRM
Fibro-slime domain protein {ECO:0000313|EMBL:EDK24418.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Cna protein B-type domain.
L1_008_000M1_scaffold_133_38
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52915..54522
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QY07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27211.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
surface protein
L1_008_000M1_scaffold_133_39
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54629..55516
DNA (888bp) protein (296aa)
Sortase family protein n=4 Tax=Lachnospiraceae RepID=A5KMK6_9FIRM
Sortase family protein {ECO:0000313|EMBL:EDK24422.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L1_008_000M1_scaffold_133_40
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55565..56428)
DNA (864bp) protein (288aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=5 Tax=Clostridiales RepID=A5KMK5_9FIRM
L1_008_000M1_scaffold_133_41
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56466..57701)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QF54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27208.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_133_42
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58054..58614
DNA (561bp) protein (187aa)
FHA domain protein n=5 Tax=Clostridiales RepID=A5KR57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19978.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
FOG: FHA domain
L1_008_000M1_scaffold_133_43
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58778..59188
DNA (411bp) protein (137aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KR58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27279.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_133_44
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59411..59926
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=5 Tax=Clostridiales RepID=A5KR60_9FIRM
L1_008_000M1_scaffold_133_45
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60102..61394
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Lachnospiraceae RepID=A5KR61_9FIRM
L1_008_000M1_scaffold_133_46
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61519..62517)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QY71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27276.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
LacI family transcriptional regulator
L1_008_000M1_scaffold_133_47
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62748..64106
DNA (1359bp) protein (453aa)
alpha-galactosidase (EC:3.2.1.22)
Glycoside hydrolase, family 4 n=5 Tax=Clostridiales RepID=E5XF71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27275.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_133_48
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64087..65370
DNA (1284bp) protein (428aa)
ABC transporter, solute-binding protein n=5 Tax=Clostridiales RepID=A5KR65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27274.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
extracellular solute-binding protein
L1_008_000M1_scaffold_133_49
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65421..66296
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=5 Tax=Clostridiales RepID=A5KR66_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDK23081.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
binding-protein-dependent transporters inner membrane component
L1_008_000M1_scaffold_133_50
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66307..67143
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=5 Tax=Clostridiales RepID=A5KR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27272.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_133_51
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67260..68324
DNA (1065bp) protein (355aa)
Amidohydrolase family protein n=5 Tax=Clostridiales RepID=A5KR68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27271.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
amidohydrolase
L1_008_000M1_scaffold_133_52
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68321..69133
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XF76_9FIRM
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:CCZ27270.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
BadF/BadG/BcrA/BcrD type ATPase
L1_008_000M1_scaffold_133_53
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69358..70746
DNA (1389bp) protein (463aa)
Mate efflux family protein n=4 Tax=Clostridiales RepID=E5XF90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27269.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_133_54
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71084..72283
DNA (1200bp) protein (400aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=4 Tax=Clostridiales RepID=E5XF91_9FIRM
L1_008_000M1_scaffold_133_55
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72336..72437
DNA (102bp) protein (34aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KR72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83142.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000M1_scaffold_133_56
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72493..73548
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Putative uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E5XF92_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L1_008_000M1_scaffold_133_57
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73541..74233
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=5 Tax=Clostridiales RepID=A5KPE0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDK23616.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_133_58
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74369..75817
DNA (1449bp) protein (483aa)
Potassium uptake protein, TrkH family n=3 Tax=Clostridiales RepID=A5KPE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27264.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Trk-type K+ transport systems, membrane components
L1_008_000M1_scaffold_133_59
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75965..76621
DNA (657bp) protein (219aa)
TrkA N-terminal domain protein n=5 Tax=Clostridiales RepID=A5KPE2_9FIRM
TrkA-N domain-containing protein {ECO:0000313|EMBL:EFV20007.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
K+ transport systems, NAD-binding component
L1_008_000M1_scaffold_133_60
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76639..77424
DNA (786bp) protein (262aa)
RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=A5KPE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27262.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
rRNA methylase, putative, group 3
Displaying items 31-60 of 98 in total

View Taxonomy