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L1_008_000M1_scaffold_140

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_140_31
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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30816..32630
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Elongation factor 4 n=2 Tax=Dorea RepID=R7G221_9FIRM
GTP-binding protein LepA
L1_008_000M1_scaffold_140_32
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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32630..33736
DNA (1107bp) protein (369aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EDM63165.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDM63165.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Dorea RepID=A6BGR2_9FIRM
L1_008_000M1_scaffold_140_33
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33944..34456)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7G0Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20775.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_140_34
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34459..35382)
DNA (924bp) protein (308aa)
Radical SAM protein TIGR01212 family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1J7_9FIRM
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CDE20776.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
radical SAM protein, TIGR01212 family
L1_008_000M1_scaffold_140_35
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35384..36532)
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=2 Tax=Dorea RepID=A6BGQ9_9FIRM
Malic enzyme NAD binding domain protein {ECO:0000313|EMBL:CDE20777.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_140_36
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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36794..38134
DNA (1341bp) protein (447aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Transcription termination factor Rho n=1 Tax=Dorea longicatena CAG:42 RepID=R7G226_9FIRM
transcription termination factor Rho
L1_008_000M1_scaffold_140_37
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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38235..38438
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=2 Tax=Dorea RepID=A6BGQ7_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
LSU ribosomal protein L31P
L1_008_000M1_scaffold_140_38
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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38549..39475
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63159.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted metal-dependent enzyme
L1_008_000M1_scaffold_140_39
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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39447..40310
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Release factor glutamine methyltransferase n=2 Tax=Dorea RepID=A6BGQ5_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L1_008_000M1_scaffold_140_40
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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40329..41405
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=2 Tax=Dorea RepID=A6BGQ4_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
bacterial peptide chain release factor 1 (bRF-1)
L1_008_000M1_scaffold_140_41
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41466..42377
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63155.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_140_42
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42420..43607
DNA (1188bp) protein (396aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDM63154.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDM63154.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=2 Tax=Dorea RepID=A6BGQ1_9FIRM
L1_008_000M1_scaffold_140_43
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43617..44672
DNA (1056bp) protein (352aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=2 Tax=Dorea RepID=A6BGQ0_9FIRM
L1_008_000M1_scaffold_140_44
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44685..45197
DNA (513bp) protein (171aa)
Putative small multi-drug export protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGP9_9FIRM
Putative small multi-drug export protein {ECO:0000313|EMBL:EDM63152.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted membrane protein
L1_008_000M1_scaffold_140_45
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45214..46245
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Dorea RepID=R7G468_9FIRM
L1_008_000M1_scaffold_140_46
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46650..47609
DNA (960bp) protein (320aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=2 Tax=Dorea RepID=A6BGP7_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EDM63150.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_140_47
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47631..48956
DNA (1326bp) protein (442aa)
Mur ligase middle domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1L0_9FIRM
Mur ligase middle domain protein {ECO:0000313|EMBL:CDE20791.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
UDP-N-acetylmuramyl tripeptide synthase
L1_008_000M1_scaffold_140_48
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48956..49687
DNA (732bp) protein (244aa)
CobB/CobQ-like protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G238_9FIRM
CobB/CobQ-like protein {ECO:0000313|EMBL:CDE20793.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted glutamine amidotransferase
L1_008_000M1_scaffold_140_49
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49695..50054)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGP4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM63147.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator, XRE family
L1_008_000M1_scaffold_140_50
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50235..50468
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7G0Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20795.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_140_51
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50582..51040
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63145.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_140_52
unknown

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51055..51207
DNA (153bp) protein (51aa)

This feature has no annotations

L1_008_000M1_scaffold_140_53
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51200..52261
DNA (1062bp) protein (354aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGP1_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L1_008_000M1_scaffold_140_54
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52254..56795
DNA (4542bp) protein (1514aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA polymerase III polC-type n=1 Tax=Dorea longicatena CAG:42 RepID=R7G242_9FIRM
DNA polymerase III subunit alpha
L1_008_000M1_scaffold_140_55
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56833..57405
DNA (573bp) protein (191aa)
Putative rRNA methylase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G012_9FIRM
Putative rRNA methylase {ECO:0000313|EMBL:CDE20799.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L1_008_000M1_scaffold_140_56
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57459..57935
DNA (477bp) protein (159aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G103_9FIRM
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:CDE20800.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
5-nitroimidazole antibiotic resistance protein
L1_008_000M1_scaffold_140_57
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58046..59794
DNA (1749bp) protein (583aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=2 Tax=Dorea RepID=A6BGN7_9FIRM
indolepyruvate ferredoxin oxidoreductase subunit alpha
L1_008_000M1_scaffold_140_58
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59794..60363
DNA (570bp) protein (190aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Putative indolepyruvate ferredoxin oxidoreductase beta subunit n=1 Tax=Dorea longicatena CAG:42 RepID=R7G479_9FIRM
Putative indolepyruvate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CDE20802.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_140_59
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60382..61713
DNA (1332bp) protein (444aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G245_9FIRM
L1_008_000M1_scaffold_140_60
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61729..62172
DNA (444bp) protein (148aa)
ACT domain protein n=2 Tax=Dorea RepID=A6BGN4_9FIRM
ACT domain protein {ECO:0000313|EMBL:EDM63137.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
amino acid-binding ACT domain-containing protein
Displaying items 31-60 of 94 in total

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