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L1_008_000M1_scaffold_143

Search features with annotation key words

Displaying items 61-90 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_143_61
unknown

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81203..81775
DNA (573bp) protein (191aa)

This feature has no annotations

L1_008_000M1_scaffold_143_62
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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82144..82821
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RR03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35297.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Hypothetical protein
L1_008_000M1_scaffold_143_63
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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82802..83437
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RKG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35296.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Hypothetical protein with helix-turn-helix motif
L1_008_000M1_scaffold_143_64
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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83574..84122
DNA (549bp) protein (183aa)
Transcriptional regulator AbrB family n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BIR7_9FIRM
Transcriptional regulator AbrB family {ECO:0000313|EMBL:CDD65023.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
AbrB family transcriptional regulator
L1_008_000M1_scaffold_143_65
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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84318..84593
DNA (276bp) protein (92aa)
DNA-binding protein HU n=1 Tax=Clostridium sp. CAG:127 RepID=R5PL33_9CLOT
DNA-binding protein HU {ECO:0000313|EMBL:CCZ09652.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Bacterial nucleoid DNA-binding protein
L1_008_000M1_scaffold_143_66
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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84686..84925
DNA (240bp) protein (80aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=1 Tax=Clostridium sp. CAG:299 RepID=R7AM93_9CLOT
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) {ECO:0000313|EMBL:CDD43717.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000M1_scaffold_143_67
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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85010..85303
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E0A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82257.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
sporulation protein YabP
L1_008_000M1_scaffold_143_68
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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85282..85956
DNA (675bp) protein (225aa)
Putative spore cortex biosynthesis protein YabQ n=3 Tax=Lachnospiraceae RepID=C9L4W5_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG83427.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Spore cortex biosynthesis protein, YabQ-like protein
L1_008_000M1_scaffold_143_69
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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86196..87839
DNA (1644bp) protein (548aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Protein serine/threonine phosphatase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P341_9FIRM
Protein serine/threonine phosphatase {ECO:0000313|EMBL:CCZ03507.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
L1_008_000M1_scaffold_143_70
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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87851..89245
DNA (1395bp) protein (465aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037F4CA1
L1_008_000M1_scaffold_143_71
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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89313..89840
DNA (528bp) protein (176aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase Hpt {ECO:0000313|EMBL:ADL35636.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ADL35636.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
hypoxanthine phosphoribosyltransferase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B769F5
L1_008_000M1_scaffold_143_72
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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89865..91757
DNA (1893bp) protein (631aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKB8_9FIRM
microtubule-severing ATPase
L1_008_000M1_scaffold_143_73
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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91787..93850
DNA (2064bp) protein (688aa)
Glycosidases (EC:3.2.1.20)
Putative neopullulanase 1 n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQJ6_9FIRM
Putative neopullulanase 1 {ECO:0000313|EMBL:CDC96504.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L1_008_000M1_scaffold_143_74
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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94033..95277
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ62226.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ATPase AAA
L1_008_000M1_scaffold_143_75
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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95279..95914
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUP0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11080.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_143_76
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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96128..96493
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T101_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95995.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_143_77
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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96866..97366
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87249.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_008_000M1_scaffold_143_78
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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97384..97821
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GK82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21641.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L1_008_000M1_scaffold_143_79
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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97837..98565
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULX3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74312.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_143_80
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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99469..100539
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ62226.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ATPase AAA
L1_008_000M1_scaffold_143_81
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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100541..100816
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUP0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11080.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_143_82
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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100791..101171
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUP0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11080.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_143_83
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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101438..102364
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78693.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L1_008_000M1_scaffold_143_84
unknown

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102429..104321
DNA (1893bp) protein (631aa)

This feature has no annotations

L1_008_000M1_scaffold_143_85
unknown

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104478..112733
DNA (8256bp) protein (2752aa)

This feature has no annotations

L1_008_000M1_scaffold_143_86
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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112858..114069
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z9S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50518.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_143_87
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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114088..114798
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78692.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_143_88
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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114867..115868
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97421.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_143_89
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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116200..116610
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LF31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60770.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_008_000M1_scaffold_143_90

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116594..116791
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RVN2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC45585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 61-90 of 95 in total

View Taxonomy