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L1_008_000M1_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_245_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(251..1132)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EWP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01216.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
PHP domain-containing protein
L1_008_000M1_scaffold_245_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(1317..2954)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01215.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000M1_scaffold_245_3
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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3130..4113
DNA (984bp) protein (328aa)
LacI family transcription regulator n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKW7_9FIRM
LacI family transcription regulator {ECO:0000313|EMBL:CDB01213.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LacI family transcription regulator
L1_008_000M1_scaffold_245_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

4364..4927
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01210.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_245_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

4930..6003
DNA (1074bp) protein (358aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKW3_9FIRM
arabinogalactan endo-1,4-beta-galactosidase
L1_008_000M1_scaffold_245_6
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6017..7213
DNA (1197bp) protein (399aa)
Extracellular solute-binding protein family 1 n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3A9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDF45144.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
family 1 extracellular solute-binding protein
L1_008_000M1_scaffold_245_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

7221..8132
DNA (912bp) protein (304aa)
Sugar ABC transporter inner membrane protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EML7_9FIRM
Sugar ABC transporter inner membrane protein {ECO:0000313|EMBL:CDB01185.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sugar ABC transporter inner membrane protein
L1_008_000M1_scaffold_245_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

8133..8978
DNA (846bp) protein (282aa)
ABC transporter transmembrane protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FGJ9_9FIRM
ABC transporter transmembrane protein {ECO:0000313|EMBL:CDB01182.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter transmembrane protein
L1_008_000M1_scaffold_245_9
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

9074..10489
DNA (1416bp) protein (472aa)
Major facilitator superfamily MFS_1 n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZWR3_9FIRM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDD47769.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
MFS transporter
L1_008_000M1_scaffold_245_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10649..11479
DNA (831bp) protein (277aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X0L5_9CLOT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CDC99972.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L1_008_000M1_scaffold_245_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(11594..11809)
DNA (216bp) protein (72aa)
Cold-shock DNA-binding domain protein n=2 Tax=Firmicutes RepID=R6EE60_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CDA98155.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
cold-shock DNA-binding protein family
L1_008_000M1_scaffold_245_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

12081..12920
DNA (840bp) protein (280aa)
Predicted membrane protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMZ5_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDA98156.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted membrane protein
L1_008_000M1_scaffold_245_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

12960..13589
DNA (630bp) protein (210aa)
PTS system beta-glucoside-specific IIABC subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F7X0_9FIRM
PTS system beta-glucoside-specific IIABC subunit {ECO:0000313|EMBL:CDA98157.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
PTS system beta-glucoside-specific transporter subunit IIABC
L1_008_000M1_scaffold_245_14
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(13535..14377)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98158.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_245_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

14540..16081
DNA (1542bp) protein (514aa)
Glycoside hydrolase family 43 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EM07_9FIRM
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CDA98159.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_245_16
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

16277..17623
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EE65_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDA98160.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
MATE efflux family protein
L1_008_000M1_scaffold_245_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

17786..19090
DNA (1305bp) protein (435aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMZ8_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDA98161.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_245_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

19100..20533
DNA (1434bp) protein (478aa)
Transcriptional regulator LuxR family n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECA8_9FIRM
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDA98163.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L1_008_000M1_scaffold_245_19
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20542..20862)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7B1X3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD56107.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L1_008_000M1_scaffold_245_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

21124..22518
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EX47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01699.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_245_21
unknown

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22541..23101
DNA (561bp) protein (187aa)

This feature has no annotations

L1_008_000M1_scaffold_245_22
unknown

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23121..23483
DNA (363bp) protein (121aa)

This feature has no annotations

L1_008_000M1_scaffold_245_23
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23497..24828
DNA (1332bp) protein (444aa)
Radical SAM domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB88_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EEG51402.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L1_008_000M1_scaffold_245_24
unknown

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24825..24944
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_245_25
unknown

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25015..25740
DNA (726bp) protein (242aa)

This feature has no annotations

L1_008_000M1_scaffold_245_26
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25782..26873
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PA48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20365.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L1_008_000M1_scaffold_245_27
unknown

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26896..27348
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_245_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27569..28414
DNA (846bp) protein (282aa)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=Clostridium sp. CAG:91 RepID=R6VSF1_9CLOT
O-Methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:CDC99960.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
O-Methyltransferase involved in polyketide biosynthesis
L1_008_000M1_scaffold_245_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28414..29346
DNA (933bp) protein (311aa)
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT23_9FIRM
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein {ECO:0000313|EMBL:EDM87247.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
BAAT / Acyl-CoA thioester hydrolase C terminal.
L1_008_000M1_scaffold_245_30
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

29545..29880
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FI15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01707.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
csoR; Possible Copper-sensing transcriptional repressor CsoR
Displaying items 1-30 of 72 in total

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