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L1_008_000M1_scaffold_262

Search features with annotation key words

Displaying items 61-83 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_262_61
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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67850..68893
DNA (1044bp) protein (348aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5R5_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEV02797.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Signal transduction histidine kinase
L1_008_000M1_scaffold_262_62
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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69115..69495
DNA (381bp) protein (127aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATK1_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL13548.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_63
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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69452..69856
DNA (405bp) protein (135aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=Roseburia intestinalis RepID=D4KTW4_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDA55253.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_262_64
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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69849..70973
DNA (1125bp) protein (375aa)
Predicted permease n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2M2_9FIRM
Predicted permease {ECO:0000313|EMBL:CDA55254.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted permease.
L1_008_000M1_scaffold_262_65
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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70957..71889
DNA (933bp) protein (311aa)
Predicted permease n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1R0_9FIRM
Predicted permease.
Predicted permease {ECO:0000313|EMBL:CBL13550.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_66
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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72047..72424
DNA (378bp) protein (126aa)
HAD superfamily hydrolase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B866_9FIRM
HAD superfamily hydrolase {ECO:0000313|EMBL:CDA55256.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_008_000M1_scaffold_262_67
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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73113..74195
DNA (1083bp) protein (361aa)
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF n=2 Tax=Roseburia RepID=D4L1V8_9FIRM
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF {ECO:0000313|EMBL:CBL13598.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_68
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74208..74936)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BRH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55882.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_262_69
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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75073..75531
DNA (459bp) protein (153aa)
Membrane protein implicated in regulation of membrane protease activity n=3 Tax=Roseburia RepID=D4KLS2_9FIRM
Membrane protein implicated in regulation of membrane protease activity
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:CBL07824.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_262_70
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75534..76385
DNA (852bp) protein (284aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1W0_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBL13600.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_71
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76403..77347
DNA (945bp) protein (315aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEV02788.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEV02788.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
4-phosphoerythronate dehydrogenase n=2 Tax=Roseburia RepID=C7G5Q6_9FIRM
L1_008_000M1_scaffold_262_72
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77524..78492)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1W2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13602.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_73
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78828..80225
DNA (1398bp) protein (466aa)
Predicted Fe-S oxidoreductases n=3 Tax=Roseburia RepID=D4KLS6_9FIRM
Predicted Fe-S oxidoreductases
Radical SAM domain protein {ECO:0000313|EMBL:CDA55888.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_262_74
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80427..81266
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02785.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Uncharacterised protein family (UPF0104).
L1_008_000M1_scaffold_262_75
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81366..82298
DNA (933bp) protein (311aa)
Membrane protease subunits, stomatin/prohibitin homologs n=4 Tax=Roseburia RepID=D4KLS8_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
Membrane protease subunits, stomatin/prohibitin homologs {ECO:0000313|EMBL:CBL13604.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_76
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82399..83388
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Roseburia RepID=C7G5Q1_9FIRM
L1_008_000M1_scaffold_262_77
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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83468..84445
DNA (978bp) protein (326aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=3 Tax=Roseburia RepID=D4L1W7_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_262_78
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84438..84779
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G5P9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13608.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_262_79
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84801..85592
DNA (792bp) protein (264aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Type III pantothenate kinase n=4 Tax=Roseburia RepID=D4KLT0_9FIRM
L1_008_000M1_scaffold_262_80
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85665..86657
DNA (993bp) protein (331aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
tRNA-dihydrouridine synthase n=2 Tax=Roseburia RepID=D4KLT1_9FIRM
tRNA-U20-dihydrouridine synthase
L1_008_000M1_scaffold_262_81
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86767..87306
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KLT2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07834.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_262_82
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87379..87858
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5P5_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
transcription elongation factor GreA
L1_008_000M1_scaffold_262_83
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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87917..89521
DNA (1605bp) protein (535aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5P4_9FIRM
Displaying items 61-83 of 83 in total

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