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L1_008_000M1_scaffold_283

Search features with annotation key words

Displaying items 31-60 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_283_31
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33345..34259)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R005_CLOSW
Membrane protein {ECO:0000313|EMBL:KEZ89695.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L1_008_000M1_scaffold_283_32
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34408..36018
DNA (1611bp) protein (537aa)
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI (EC:5.4.2.1)
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) {ECO:0000256|SAAS:SAAS00058367}; EC=5.4.2.12 {ECO:0000256|SAAS:SAAS00058367};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRQ2_CLOSH
L1_008_000M1_scaffold_283_33
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36087..36569
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRV6_ACEAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL13247.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
L1_008_000M1_scaffold_283_34
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36566..37114
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D8FD
Uncharacterized protein {ECO:0000313|EMBL:EPR13216.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
hypothetical protein
L1_008_000M1_scaffold_283_35
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37118..37345
DNA (228bp) protein (76aa)
Small integral membrane protein (DUF2273) n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LW58_CLOCD
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:GAE87656.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L1_008_000M1_scaffold_283_36
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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37373..37837
DNA (465bp) protein (155aa)
N utilization substance protein B homolog n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJK1_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
transcription antitermination factor NusB
L1_008_000M1_scaffold_283_37
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37821..39044
DNA (1224bp) protein (408aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. BNL1100 RepID=H2JDX7_9CLOT
exodeoxyribonuclease VII large subunit
L1_008_000M1_scaffold_283_38

Not on your lists

39060..39266
DNA (207bp) protein (69aa)
Exodeoxyribonuclease VII small subunit {ECO:0000313|EMBL:KHO49914.1}; EC=3.1.11.6 {ECO:0000313|EMBL:KHO49914.1};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Bacillus marmarensis DSM 21297 RepID=U6SN40_9BACI
xseB; exodeoxyribonuclease VII small subunit
L1_008_000M1_scaffold_283_39
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39259..40182
DNA (924bp) protein (308aa)
Polyprenyl synthetase n=4 Tax=Clostridium thermocellum RepID=E6UQJ9_CLOTL
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ABN52066.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_283_40
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40131..42080
DNA (1950bp) protein (650aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D8F5
deoxyxylulose-5-phosphate synthase
L1_008_000M1_scaffold_283_41
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42077..42814
DNA (738bp) protein (246aa)
Hemolysin A n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0I6_9FIRM
Hemolysin A {ECO:0000313|EMBL:CDE81483.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hemolysin
L1_008_000M1_scaffold_283_42
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

42849..43718
DNA (870bp) protein (290aa)
Probable inorganic polyphosphate/ATP-NAD kinase id=4676898 bin=GWC2_Clostridiales_40_7 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
putative sugar kinase
Tax=GWC2_Clostridiales_40_7_curated
L1_008_000M1_scaffold_283_43
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

43708..44157
DNA (450bp) protein (150aa)
arginine repressor ArgR
ArgR family transcriptional regulator id=4676894 bin=GWC2_Clostridiales_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Tax=GWC2_Clostridiales_40_7_curated
L1_008_000M1_scaffold_283_44
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44174..45883
DNA (1710bp) protein (570aa)
DNA repair protein RecN n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D485
DNA replication and repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_283_45
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45989..47089
DNA (1101bp) protein (367aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1F9_MAHA5
Stage IV sporulation protein B {ECO:0000313|EMBL:BAB81520.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L1_008_000M1_scaffold_283_46
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47120..49414)
DNA (2295bp) protein (765aa)
Ig-like domain-containing surface protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W942_DESOD
Ig-like domain-containing surface protein
Ig-like domain-containing surface protein {ECO:0000313|EMBL:AET68683.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L1_008_000M1_scaffold_283_47
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49495..51594)
DNA (2100bp) protein (700aa)
Nucleotidyl transferase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNE9_9CLOT
Nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:AKA70732.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L1_008_000M1_scaffold_283_48
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51686..52933)
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R2T8_9CLOT
competence/damage-inducible protein CinA
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
L1_008_000M1_scaffold_283_49
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53083..54696
DNA (1614bp) protein (538aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0A3_9CLOT
Sporulation protein SpoVB {ECO:0000313|EMBL:KGK87540.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
polysaccharide biosynthesis protein
L1_008_000M1_scaffold_283_50
Clostridium sp. CAG:492, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54735..55253
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:492 RepID=R5YVB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA30765.1}; TaxID=1262813 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:492.;"
L1_008_000M1_scaffold_283_51
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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55315..56262
DNA (948bp) protein (316aa)
Putative ABC transporter ATP-binding protein YhcH n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZJ20_PAEAL
Putative ABC transporter ATP-binding protein YhcH {ECO:0000313|EMBL:EJW19599.1}; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_283_52
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56255..57790
DNA (1536bp) protein (512aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6YTQ5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD37275.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
hypothetical protein
L1_008_000M1_scaffold_283_53
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57809..58375
DNA (567bp) protein (189aa)
Putative transcriptional regulator with cupin domain n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1E4_CLOCD
putative transcriptional regulator with cupin domain
Putative transcriptional regulator with cupin domain {ECO:0000313|EMBL:AEV69159.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_283_54
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


58466..58732
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Paenibacillus massiliensis RepID=UPI00037B81A3
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
rpsT; protein RpsT
L1_008_000M1_scaffold_283_55
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

58841..59677
DNA (837bp) protein (279aa)
Acetyl esterase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1R0_MAHA5
acetyl esterase
Acetyl esterase {ECO:0000313|EMBL:AEE97110.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L1_008_000M1_scaffold_283_56
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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59703..60455
DNA (753bp) protein (251aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZIW5_9FIRM
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CDD30402.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
xylose isomerase
L1_008_000M1_scaffold_283_57
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60457..61335
DNA (879bp) protein (293aa)
Dehydrogenase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NTC8_9CLOT
Dehydrogenase {ECO:0000313|EMBL:CDC11629.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
xylose isomerase domain-containing protein TIM barrel
L1_008_000M1_scaffold_283_58
Bacillus halodurans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(61411..62805)
DNA (1395bp) protein (465aa)
BH1864 protein n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KBR1_BACHD
hypothetical protein
BH1864 protein {ECO:0000313|EMBL:BAB05583.1}; TaxID=272558 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM; 9153 / C-125).;"
L1_008_000M1_scaffold_283_59
Geobacillus sp. Y412MC52, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(63049..64443)
DNA (1395bp) protein (465aa)
Extracellular solute-binding protein family 1 n=2 Tax=Geobacillus RepID=C9RT68_GEOSY
hypothetical protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADU94283.1}; Flags: Precursor;; TaxID=550542 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y412MC52).;"
L1_008_000M1_scaffold_283_60
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64647..65204
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium thermocellum JW20 RepID=D1NIF4_CLOTM
elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Displaying items 31-60 of 73 in total

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