ggKbase home page

L1_008_000M1_scaffold_241_37

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 42966..43703

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 245.0
  • Bit_score: 473
  • Evalue 1.00e-130
RNA methyltransferase, RsmE family (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 246.0
  • Bit_score: 319
  • Evalue 6.60e-85
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQX5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 245.0
  • Bit_score: 473
  • Evalue 7.30e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dorea longicatena CAG:42 → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
ATGCAACATTTTTTTGTGTCACCGGAGCAGGTGAAGGAAGAAAAGATCTACGTAGAGGGCGGCGACGTCAATCATATGAAGAATGTACTCCGCATGAAGACCGGTGAAGAACTTACGGTAAATGACGGAGAAGGCAGTCAGTACCTGTGTGCGGTGGAATCCTATGAAGCAGATATGGCAGTGCTTAAGATACTGGAGAAAAAGCAGGACGAGAGCGAGCTTGCATCAAAGATCTATCTGTTCCAAGGACTTCCAAAGCAGGACAAGATGGAACTGATCGTGCAGAAGTCGGTAGAACTCGGCGCATATCAGGTAATCCCGGTGGCGACAAAGCGAGCCGTGGTCAAGCTGGATGCGAAGAAGGCGAAGAAGAAGGTCGAACGCTGGCAGCAGATTGCGGTCAGTGCGGCGAAGCAGGCAGGACGAGGTATTATTCCTGAGGTGGGAGAAGTATGCACTTATGCGCAGGCATTAAAGCAGGCAGAAGAACTGGACGTTGTCCTGATCCCATACGAACTGGCAAAAGGGATGGAAGAGACGAAGCAGATCATCGCAGGGATCAGACCGGGGCAGTCGGTCGGCATCTTTATCGGACCGGAAGGCGGCTTTGAGGAAGAAGAAGTAGCACTTGCCATGAAAACCGGGGCAAATCCGGTGACACTTGGCAAGAGAATCCTTCGGACAGAGACTGCAGGACTTATGATGCTTTCGGTTCTGATGTTCCATCTGGAAGGGTAG
PROTEIN sequence
Length: 246
MQHFFVSPEQVKEEKIYVEGGDVNHMKNVLRMKTGEELTVNDGEGSQYLCAVESYEADMAVLKILEKKQDESELASKIYLFQGLPKQDKMELIVQKSVELGAYQVIPVATKRAVVKLDAKKAKKKVERWQQIAVSAAKQAGRGIIPEVGEVCTYAQALKQAEELDVVLIPYELAKGMEETKQIIAGIRPGQSVGIFIGPEGGFEEEEVALAMKTGANPVTLGKRILRTETAGLMMLSVLMFHLEG*