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L1_008_000M1_scaffold_340_10

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(5991..6950)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 619
  • Evalue 2.00e-174
DNA-directed RNA polymerase subunit alpha n=2 Tax=Lachnospiraceae RepID=R6GF25_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 619
  • Evalue 1.40e-174
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 319.0
  • Bit_score: 553
  • Evalue 3.50e-155

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Taxonomy

Roseburia sp. CAG:471 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 960
ATGTTTGATTTTAACAAACCAAAAATTGAGATTACAGAAATTTCCGATGATAAAAAATATGGCCGCTTTGTAGTAGAACCGTTGGAGCGTGGCTATGGTATTACTCTGGGTAACTCCCTGAGAAGAATCATGTTGTCCTCTCTGCCGGGTGCTGCAGTCAGCCAGGTAAAAATCGAAGGCGTTCTGCATGAGTTCAGTTCCATCCCGGGTGTAAAAGAGGATGTAACCGAAATCATCATGAACCTGAAGAGCCTTGCGATCAAGAACACAAGCGAAAGCAATGATCCGAAGATCGCATACATCGAGTTCGAAGGCGAAGGCGTGGTAAGAGCATCTGATATCCAGGTTGACCAGGATATCGAGATCATGAATCCAAACCAGGTAATCGCTACATTAAACGGCGGACCAGACAGCAAGCTGTATATGGAACTGACCATTACAAAAGGTCGTGGTTACGTCAGTGCAGATAAAGGAAAAACAGATGATATGCCGATCGGCGTATTAGCTGTAGATGCAATCTATACACCGGTAGAGCGTGTAAACCTGACAGTTCAGAACACTCGTGTCGGTCAGATCACTGACTACGATAAACTGACACTGGATGTTTATACAAAGGGAACTCTGGATCCGGATGAAGCAGTCAGCCTGGCTGCGAAAGTATTGAGCGAGCATCTGAAACTGTTCATTGACCTCTCCGAAAATGCAAAGACTGCAGAAGTCATGATTGAAAAAGAGGACAATGAAAAAGAGAAAGTTCTGGAAATGAACATCGACGAGCTGGAGCTGTCCGTTCGTTCCTACAACTGTCTGAAGAGAGCCGGTATCAATACCGTTGAAGAACTTTGCAACAGAACTTCTGAAGATATGATGAAAGTCCGTAACCTGGGACGTAAATCTCTGGAAGAAGTACTTGCAAAATTAAAAGAACTGGGATTGCAGTTAAATCCTGGTGAAGAATAA
PROTEIN sequence
Length: 320
MFDFNKPKIEITEISDDKKYGRFVVEPLERGYGITLGNSLRRIMLSSLPGAAVSQVKIEGVLHEFSSIPGVKEDVTEIIMNLKSLAIKNTSESNDPKIAYIEFEGEGVVRASDIQVDQDIEIMNPNQVIATLNGGPDSKLYMELTITKGRGYVSADKGKTDDMPIGVLAVDAIYTPVERVNLTVQNTRVGQITDYDKLTLDVYTKGTLDPDEAVSLAAKVLSEHLKLFIDLSENAKTAEVMIEKEDNEKEKVLEMNIDELELSVRSYNCLKRAGINTVEELCNRTSEDMMKVRNLGRKSLEEVLAKLKELGLQLNPGEE*