ggKbase home page

L1_008_000M1_scaffold_751_8

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(7574..8443)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 289.0
  • Bit_score: 563
  • Evalue 1.80e-158
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 289.0
  • Bit_score: 563
  • Evalue 8.90e-158
Shikimate dehydrogenase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T4B8_ROSHA similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 289.0
  • Bit_score: 563
  • Evalue 6.40e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia hominis → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
ATGGACAGCAGAATTTCAGGACACACAGGATTATTGGCATTGATTGGTTCACCGGTCGGACATTCGGGTTCGCCGGCAATGTATAACTACAGTTTCGAGCGTCTGGGACTGGATTATGTGTATGTGGCTTTTGACATCAAGGTGGAGGAAGTGGCGGATGCCATTGCTGCCATGCGCACATTCAAGATGCGCGGCTGCAATGTCACCATGCCGTGTAAGACAGAGGTTGTCAGATACATGGATGAATTGTCTCCGGCAGCACAGATTATCGGGGCGGTCAATACGATCGTAAATGACAACGGTAGATTGACCGGTCATATTACCGACGGTGAGGGATTTGTGCATAATCTGAAGGATCACGGGATCGATATTAAGGGCAAGAAGATCACGGTTGCAGGCGGAGGCGGTGCCGCTACTGCCATTCAGGTGCAGTGCGCGCTTGACGGTGCAAGAGAGATTTCCATTTTTAATATCAAGGATGCCTTTTTCGAGAGAACGCTGAAGACGGCGGAGAAGATCCGTGCGGCAGTTCCGGCGTGCGTGGTAAATGTCTATGATATTGCAGACACTGCGCGGATGACCGAGGAGATCGCGTCCAGCGATATTTTTGCAAATGCGACGATCGTTGGCATGAAGCCGATGGAAAATGAGAGTGTGGTAAAGGACACTTCTGCATTCCGACCGGGGTTAGTGGTGGCGGATGCCGTCTACAACCCGGAGGAGACGAGATTGCTCTGGGAGGCGAAGGAAGCCGGAGCAACCTGTATCGGCGGCAAGGGAATGCTGCTGTGGCAGGGCGTGGCTGCCTTTAAACTGTATACCGGAAAAGATATGCCGGTCGAGGAAGTCAAAGAGCGTTTTTTTAGCTAG
PROTEIN sequence
Length: 290
MDSRISGHTGLLALIGSPVGHSGSPAMYNYSFERLGLDYVYVAFDIKVEEVADAIAAMRTFKMRGCNVTMPCKTEVVRYMDELSPAAQIIGAVNTIVNDNGRLTGHITDGEGFVHNLKDHGIDIKGKKITVAGGGGAATAIQVQCALDGAREISIFNIKDAFFERTLKTAEKIRAAVPACVVNVYDIADTARMTEEIASSDIFANATIVGMKPMENESVVKDTSAFRPGLVVADAVYNPEETRLLWEAKEAGATCIGGKGMLLWQGVAAFKLYTGKDMPVEEVKERFFS*