ggKbase home page

L1_008_000M1_scaffold_208_12

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 16911..20636

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 1241.0
  • Bit_score: 2475
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBL14791.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBL14791.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1241.0
  • Bit_score: 2475
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L596_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1241.0
  • Bit_score: 2475
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus bromii → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3726
ATGGTTAATGTCAAACCCGTAAAGCTTGGCAACACCGAAAGAATGAGTTTTGGTAAAATCGATGAAGTAATTGATATGCCTAATCTTATCGACATTCAGAAAGCGTCATACAAATGGTTGCTTGACGAAGGTCTTAAAGAAGTATTTAAAGATGTTTCGGGCATTACCGATTATCAGGACAACCTTGTTCTCGATTTTATCGACTACACACTTGATGTTGATCACCCAAACTACAGCGTAATTGAGTGTAAGGTTCGTGATGCAACATATTCAGCTGCTCTTAGAGTAACCGCAAGACTTTTGAACAAGTCAACGGGTGAAATCAAAGAGAGCAATGTATTTATGGGCGATTTCCCGCTGATGACCGCAAGCGGCACATTCGTTATCAACGGTGCTGAGCGTGTTATCGTTTCACAGCTTGTAAGAAGCCCGGGCGTTTACTATAAAATGGATCACGATAAAACCGGTAAGGAACTGTATTCAACAACAGTTATCCCGAATCGTGGTGCATGGCTTGAATATGAAACCGATGTAAACGATGTTTTTTATGTTCGTATTGATAAGAACCGTAAGCTTCCCGTTACATCATTCATCAGAGCACTCGGTCTTGGCACGGATGCCGAAATTCTCGACTATTTCGGTGACGATGAAAGAATGAGAGCTACTATCGAAAAGGATGCCGCTTCAAATGTTGAAGAAGGTCTTATCGAGGTTTACAAAAAGCTCCGTCCGTCTGAGCCTCCGACAGTTGACAGTGCGCAGACACACATAAACAACCTGTTCTTTGACCCCGGTCGTTATGATATGTCAAGAGTAGGCAGATATAAATACAACAAAAAGCTCGGTATTGCAAACCGTCTTGAAGGTCAGGTTCTTGCAGAGCCGATTGCCAACCCACGCACAGGCGAGGTTATGGCTCTTCGTGATGAAAAAATCACAAAGGAAAAGGCTTTTGAAATCGAAAACGCAGGTGTTAAGATTGCCTATGTAAAGGCTGCCGATGAAACAATCGTTAAGGTTATTTCAAACGGTATGGTTGACATCGCTTGCTATGTTGATTTTGACGCAGAAGCAGAGTGTGATATCAAGGAAAATGTTCGTTTTGATGTTCTTTGCGAAATTCTTGATGCTTGCGAAAACGAGGATGACCTCAAGGAAATGCTCAGAAGCCGTGCAGATGAGCTTGTTCCTAACCACATCACGGTTGACGATATCTTTGCAACAATCAACTACCTTAACTGTGTTGCTCACGGTGTCGGTAATACAGATGATATCGACCACCTCGGCAACAGAAGAATCCGCTGTGTAGGCGAACTTCTTCAGAACCAGTTCAGAATCGGTTTCTCCCGTCTTGAAAGAGTTGTAAGAGAGAGAATGACAACCCAGTCACAGGATATGGAGTCGCTTTCGCCTAACTCACTCATCAATATCCGTCCCGTAACAGCGGCAATTAAAGAATTTTTCGGTTCTTCACCGCTTTCACAGTTCATGGATCAGGGTAACCCGCTTGCAGAGCTTACCCACAAGCGTCGTCTTTCAGCCCTCGGTCCGGGCGGTCTTTCAAGAGATCGTGCAGGATTTGAGGTTCGTGACGTACACTACACACACTATGGCCGAATGTGTCCTATCGAAACTCCTGAAGGTCCTAACATCGGTCTTATCTCATATCTTGCTTCATTTGCCCGTATCAACAAGTACGGCTTTATCGAAGCTCCTTATCGTAAAATTGACAAGGAAACAGGCGTTGTAACCGACGAGGTTGTTTATATGACAGCCGATGTTGAGGATAACTACGCTGTTGCACAGGCTAACGAACCGCTTGATGAAAACGGCAGATTTGTTCATTCAAGAGTCGTAGGTCGTTACCGTGACGAGTTCGTAGAGTATTCTCCCGAAAGATTCGACTTCATGGATGTATCTCCTAAGATGGTTGTATCTGTTGCTACGGCTATGATTCCGTTCCTTGAAAACGATGACGCAAACCGTGCTCTCATGGGTGCGAACATGCAGCGTCAGGCAGTTCCGCTTCTCCGCAGTGAAGCTCCTATCGTCGGTACAGGTATGGAGTACAAGGCAGGTACAGACTCAGGCGTTTGTATCCTCGCTGAGGAAGACGGTATCGTTATGAGCGTTGACGCCCGTAACATTCGTGTACAGTATGACTCGGGCAGAGTTCAGGACTTTGAGGTTATCAAGTTCCTCCGCTCTAACCAGGGTACATGTATCAACCAGCGTCCTATCGTGTCAAGAGGACAGAGAGTTAAGAAGGGTGAAGTTCTCGCAGACGGTCCGGCTACCGAAAACGGTGAAGTTGCTCTCGGTAAGAACGCTCTCATCGGCTTTATGACATGGGAAGGTTACAACTACGAGGATGCTGTTCTTATCAACGAAAAAATCGTTCGTGATGATGTTTATACATCAATTCACATTGAAGAATATGACACAGAGGCAAGAGATACAAAGCTCGGACCCGAAGAGATTACAAGAGATATCCCTAATGTAGGTGAAGATGTTCTCAAGTATCTTGACGAGGACGGTATCATTCAGATCGGTTCTGAGGTTAAAGCAGGCGATATCCTTGTCGGTAAAGTAACTCCAAAGGGTGAAACAGAGCTTACAGCCGAGGAAAGACTCCTTCGTGCAATCTTCGGTGAAAAGGCAAGAGAAGTCAGAGATACATCTCTCCGTGTGCCTCACGGTGAATGCGGTACTGTTGTTGATGTTAAGGTGTTTACCCGTGCAGACAGCAGAAACGAACTCCAGCCCGGTGTAAACAAGGTTGTAAGAGTTTACCTTGCACTCAAGAGAAAAATCAGCGTAGGCGATAAGATGGCAGGTCGTCACGGTAACAAGGGTGTTGTTTCAAGAATTCTCCCAATGGAAGATATGCCGTTCCTTCCTGACGGTACTCCGCTTGACATCGTACTTAACCCGTTGGGCGTACCTTCTCGTATGAACATCGGTCAGGTTCTTGAGGTTCACCTCGGTTATGCCGCAAAGGCGCTTGGCTGGAAGATTATGACTCCTGTATTTGACGGTGCTCATGAGCAGGACATTTTCCAGTGTCTTAAAGACGCAGGTTACAGCGAGGACGGTAAGACATGGCTTGTTGACGGTCGTACAGGCGAGCGTTTCGATAACCCTGTAACAGTAGGTTATATGTACTACCTCAAGCTCCATCACCTCGTTGATGAAAAAATCCACGCAAGAAGCACAGGTCCTTACTCTCTCGTTACACAGCAGCCACTCGGCGGTAAAGCTCAGTTCGGCGGTCAGCGTTTCGGTGAGATGGAAGTTTGGGCACTTGAGGCTTACGGTGCTGCTTATACACTTCAGGAAATTCTTACAGTTAAGTCGGACGATGTTGTCGGCCGTGTTAAGACCTACGAGGCTATCGTTAAAGGTCAGAATATTCCTGCTCCGGGTATTCCTGAGTCATTCAGAGTTCTTATTAAGGAACTCCAGTCACTTTCACTTGATGTTCGTGTTCTTAACTCTGACGGTGAAGAAATTGACATTAAGCAGAAGTTTGATGAGGACGAGGATATTGTTGATGCAACAAATCCGGAATTTGAAGAAGACCATGTAATGACATCAATGGACGGCTACACTCTTGACGAGGGCGGCGAAGAAGGCAATATGTTTGACGATTCACTTGCCGATGTTGAAGAGGACAGCTATACATCGGATGATTTCAGCGATGACTTTGGCAGTGACGATATGTAA
PROTEIN sequence
Length: 1242
MVNVKPVKLGNTERMSFGKIDEVIDMPNLIDIQKASYKWLLDEGLKEVFKDVSGITDYQDNLVLDFIDYTLDVDHPNYSVIECKVRDATYSAALRVTARLLNKSTGEIKESNVFMGDFPLMTASGTFVINGAERVIVSQLVRSPGVYYKMDHDKTGKELYSTTVIPNRGAWLEYETDVNDVFYVRIDKNRKLPVTSFIRALGLGTDAEILDYFGDDERMRATIEKDAASNVEEGLIEVYKKLRPSEPPTVDSAQTHINNLFFDPGRYDMSRVGRYKYNKKLGIANRLEGQVLAEPIANPRTGEVMALRDEKITKEKAFEIENAGVKIAYVKAADETIVKVISNGMVDIACYVDFDAEAECDIKENVRFDVLCEILDACENEDDLKEMLRSRADELVPNHITVDDIFATINYLNCVAHGVGNTDDIDHLGNRRIRCVGELLQNQFRIGFSRLERVVRERMTTQSQDMESLSPNSLINIRPVTAAIKEFFGSSPLSQFMDQGNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLISYLASFARINKYGFIEAPYRKIDKETGVVTDEVVYMTADVEDNYAVAQANEPLDENGRFVHSRVVGRYRDEFVEYSPERFDFMDVSPKMVVSVATAMIPFLENDDANRALMGANMQRQAVPLLRSEAPIVGTGMEYKAGTDSGVCILAEEDGIVMSVDARNIRVQYDSGRVQDFEVIKFLRSNQGTCINQRPIVSRGQRVKKGEVLADGPATENGEVALGKNALIGFMTWEGYNYEDAVLINEKIVRDDVYTSIHIEEYDTEARDTKLGPEEITRDIPNVGEDVLKYLDEDGIIQIGSEVKAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGECGTVVDVKVFTRADSRNELQPGVNKVVRVYLALKRKISVGDKMAGRHGNKGVVSRILPMEDMPFLPDGTPLDIVLNPLGVPSRMNIGQVLEVHLGYAAKALGWKIMTPVFDGAHEQDIFQCLKDAGYSEDGKTWLVDGRTGERFDNPVTVGYMYYLKLHHLVDEKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGQNIPAPGIPESFRVLIKELQSLSLDVRVLNSDGEEIDIKQKFDEDEDIVDATNPEFEEDHVMTSMDGYTLDEGGEEGNMFDDSLADVEEDSYTSDDFSDDFGSDDM*