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L1_008_000M1_scaffold_211_10

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(9824..10387)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V0U5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 186.0
  • Bit_score: 226
  • Evalue 1.20e-56
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 186.0
  • Bit_score: 226
  • Evalue 3.40e-57
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 186.0
  • Bit_score: 226
  • Evalue 1.70e-56

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Taxonomy

Alistipes finegoldii → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGCAGAAACCTTTCGACATATCCGACGCGCTGCTCCGCGAGCTGCACGACCCCGAGACCCGCAGCGCGGCGTTCGGCCGTCTGCTCGAAAGCTCCCTCACCCCGCTCTACTGGCACGCACGGCGGCTTGTGGTGGTGCACGAGGACGCAGAGGACGTGGTCCAGGAGACATTGCTGCGGGCTTACAAGGGGATCGACCGCTTCCGGGGCGACGGCCCCGCACTCAAAGCCTGGCTCTACAGGATCGCCACCAACCGGGCGCTCAGTCTGCTCGGCAGGCGCAGGCGGTCGCTGCTGACCCCGCTCGATACGGTGAGCCGCACGCTGGCCGGCCGCGTAAGCGAACAGGCCGCTCCGGACAGCGACGAGCTGCTCGTGCGCTTCCAACAGGCGGTGCTGCGCCTGCCTCTCAAGCAACGGCTGGTTTTCAACCTGCGCTATTACGACGAAATGCCCTATGCCCAGATCGCCGGGGTGCTGCGGCAGCGGGAAAAAACGCTGCGCGTCAATTACCACCTGGCCGTCTGCAACCTCAAACGACAACTAACGGAACAACTGCCATGA
PROTEIN sequence
Length: 188
MQKPFDISDALLRELHDPETRSAAFGRLLESSLTPLYWHARRLVVVHEDAEDVVQETLLRAYKGIDRFRGDGPALKAWLYRIATNRALSLLGRRRRSLLTPLDTVSRTLAGRVSEQAAPDSDELLVRFQQAVLRLPLKQRLVFNLRYYDEMPYAQIAGVLRQREKTLRVNYHLAVCNLKRQLTEQLP*