ggKbase home page

L1_008_000M1_scaffold_249_18

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(38849..39418)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWC1_BIFLN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 370
  • Evalue 5.20e-100
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEI80463.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 370
  • Evalue 7.30e-100
acrr-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 189.0
  • Bit_score: 363
  • Evalue 3.10e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCCAAAGAATTGACGGAAAGCCGCCGCACCCGATACACACGGCTCGCCATGCAAGACGCGCTCGTCGAGCTGCTGCAGGACCAGCCGCTTGGGTCCATCACCGTCAAGGCATTGTGCGAGCGGGCGGACGTGAACCGTTCCACGTTCTATGCGCATTACACAAGCATTGAAGATCTACTGCACGATATCGAAGACGAGACCATGGCCTGGGTTACTGCCGCGCTCGACCAGTTGCTCGCGCAGCCTGATTCAGCCGGCATCGAGCACGTCATCGAACGTATCTGCCAATACATCGCCGACAATCGCAAGCATCTGCAGGTATTGATGAGCCCGAAAGCAGATATCGGCTTCCAACAGCAGCTACTGGGACTTATTTACAGCCGGCAGACAGTCGCCGAGCAGCTGCAGCCCGCCGCCAACGACCCGGTCGAGGCCCAAATGCGCATGCGCTTCGCCGTATCCGGCAGCATCGGCCTACTGCAATACTGGCTCGCCACCGACCTCGCAGCATCTCCGGAATCAGTGGCCCACACCATTTTCACCATGGGCATGCCCGTCTCGCAGTGA
PROTEIN sequence
Length: 190
MAKELTESRRTRYTRLAMQDALVELLQDQPLGSITVKALCERADVNRSTFYAHYTSIEDLLHDIEDETMAWVTAALDQLLAQPDSAGIEHVIERICQYIADNRKHLQVLMSPKADIGFQQQLLGLIYSRQTVAEQLQPAANDPVEAQMRMRFAVSGSIGLLQYWLATDLAASPESVAHTIFTMGMPVSQ*