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L1_008_000M1_scaffold_1210_56

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(39611..40321)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Ruminococcus RepID=C6J977_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 456
  • Evalue 1.50e-125
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 456
  • Evalue 2.10e-125
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 236.0
  • Bit_score: 395
  • Evalue 9.00e-108

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Taxonomy

Ruminococcus sp. 5_1_39BFAA → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGCTGTTATCCATTACAGGTAGTGTCAAGAATGGTGATGAACCGTTCAGGAGAAGTTTTTTATATTGGTGGAAATGATGTGCTGCCGGCACCACTGGAGCCGAAGCGTGAGGCGTTTATACTGCAGAAGCTTGGAACAGGGCAGGAAGAAGAAGCGAAGTCTGTTCTGATCGAACATAATTTAAGGCTTGTGGTGTATATTGCAAAGAAGTTTGATAACACAGGAGTCGGGGTGGAGGATCTGATCTCAATCGGAACGATTGGGCTGATCAAGGCGATCAATACCTTTAATCCTGTAAAAAACATCAAGCTTGCCACTTATGCATCCAGATGTATAGAGAATGAGATCCTGATGTATCTTCGCCGAAACAGTAAGACAAAGATGGAAGTGTCCATAGACGAACCGCTGAACGTAGACTGGGATGGAAATGAACTCCTGCTTTCTGATATTCTGGGAACTGATGAGGATGTGATTTCAAGACGTCTGGAAGATGAAGTGGAGATTTCGTTGTTATCAAAGGCAATTAGAAAGCTTTCACCGCGTGAGCAGACGATCATCCGCCTTAGATTTGGTCTGGGAAAGGAGAATGCTGCAGAGAAAACACAGAAAGAGGTTGCAGACCTTCTGGGAATTTCTCAATCATATATTTCCAGGTTGGAAAAAAGGATCATGAAGAGATTGAAAAAGGAAATTGTGAAATATGAATAG
PROTEIN sequence
Length: 237
MSCYPLQVVSRMVMNRSGEVFYIGGNDVLPAPLEPKREAFILQKLGTGQEEEAKSVLIEHNLRLVVYIAKKFDNTGVGVEDLISIGTIGLIKAINTFNPVKNIKLATYASRCIENEILMYLRRNSKTKMEVSIDEPLNVDWDGNELLLSDILGTDEDVISRRLEDEVEISLLSKAIRKLSPREQTIIRLRFGLGKENAAEKTQKEVADLLGISQSYISRLEKRIMKRLKKEIVKYE*