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L1_008_000M1_scaffold_1506_20

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(18391..19008)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPB9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 402
  • Evalue 1.70e-109
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 402
  • Evalue 2.40e-109
RNA polymerase sigma-27/28 subunit,RpsK/SigK similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 201.0
  • Bit_score: 243
  • Evalue 5.00e-62

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Taxonomy

Dorea formicigenerans → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 618
TTGAAATCTTTCCCCCTTCCCCTGACTGCTTCTGAAGAACAGTATTACCTGCAAAAATATATCGAGGGCGACTTAAATGCCAAGCATATCCTGATTGAGCATAATCTCCGGCTCGTAGCTCATATTGTCAAAAAATATCAGGCAAATGTAGAAGAAGCTGAAGATTTGCTTTCCATTGGCACCATCGGGCTAATCAAAGCAGTCGTTACATTTAATCCGGGAAAAAACGTACGTCTCGGAACTTACGCTGCACGCTGTATTGAAAATGAAATTCTGATGCATCTGCGTGCCAGAAAAAAAACTTCTCGGGAAGTCTCCCTTTATGAACCAATCGGCACGGACCGGGAAGGCAACGAAATCCAGCTTTTCGATGTAATTGAGACAGACGATCAGGAGGCCCACCGGAAAATCGAGGAAAAAGATGATATTTTGAAATTATATCAACACGTAGAGTCTAAATTATCCACCCGGGAACGTCTGGTCTTAAAAATGCGCTATGGTCTGTATAACGAAGAAGAATATACACAGCGCGAAATTGCAAAGCTTCTTGGCATCTCCCGCTCCTATGTATCCAGAATCGAAAAGAGTGCTATTGAAAAACTGCGTGGGTATTTTTAA
PROTEIN sequence
Length: 206
LKSFPLPLTASEEQYYLQKYIEGDLNAKHILIEHNLRLVAHIVKKYQANVEEAEDLLSIGTIGLIKAVVTFNPGKNVRLGTYAARCIENEILMHLRARKKTSREVSLYEPIGTDREGNEIQLFDVIETDDQEAHRKIEEKDDILKLYQHVESKLSTRERLVLKMRYGLYNEEEYTQREIAKLLGISRSYVSRIEKSAIEKLRGYF*