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L1_008_000M1_scaffold_2209_5

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(4769..8227)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1152.0
  • Bit_score: 2270
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 1152.0
  • Bit_score: 2270
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5B3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1152.0
  • Bit_score: 2270
  • Evalue 0.0

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Taxonomy

Ruminococcus bromii → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3459
ATGAATAATCTCAACTTTCTTGTTGATGTCCTCAAAGAGTCACCCGTTTTCAAAACGCTTGAAAAGAATGTCAAGCCGGGCAGAACGGTCTGTGCTTCGGGACTTTCAACAATCAACAAATCAAATATCATCTATGCGCTGTGCCGCCTCAAGGGCGTCATGGCATTTTGTCTTGCCTCCGATGAAAAAGAGGCGCAGACTCTGTGTAACGACCTTTCGTGCATGGGACTTCGTGCCTATGTTTATCCCGTGCGTGACTTCAACTTTCTTGACTTTCAGAGCCGTTCGCACGAGTACGAGCACGCAAGACTTAAAGTTTTGCTCAAGCTTATCAATCATGAATGCGATGTCGCAATTGCGTGTGTTGATGCGGCGGCACAGCTTACCGTTCCGAGAAATGTGCTTGAACAGTCGGTTATTGAATTTGAAGAGGGCAGGGAGCTCTCGCTTGAAAAGGCGACAAAGGCACTTACTCTGCTCGGCTACGAACGCTTTGATGCGGTAGAGGGCAGCGGTCAGTTTTCGCTGAGAGGCGGTATTCTCGACTTCTTTATGCCCGACAGCGACTATCCCGTGAGATGTGAATTTTGGGGCGATGAAATTACCGACCTCAGCTATTTTGACATTGAAACACAGAGAAGATTTAAAAAGGCTGACAAAATTACGCTTTCGCCCTCAACCGAAATCGTAATTGAGGACAGAGCCGCCCTTGCAGATAAAATTGAACACAAGGCAAAGCTCCTACGTTCCAAGAACAGCGCCAAAGCCAAGGAAAAACTTTTTTCAGAGGCAGAGCTTATCCGCAGCGGTGCAATGATTGCCAATGCGGACAAATTTATCAATCAGATTTACGATAAACCCGAGTCGCTTTTTGATTATCTCGACAGAAACACCCTCGTTTTTGCGTCCGAATTTACTGCAATTCAGGAACGGGGAAAGTCAATGGACTTTATCAGCAATGAAACCCTTATGCAAGGCTTTGAGGACGGAACTCTTTGCAGAGGTTTTGACCGCTTTGCGCTCACATTCAACGAATGTACCGAGTTTTTGCAAAGTCACGGAACAATCGTGCTTGAAAACTTTGTTCACGGAAGTATGCCTATCAAGCTGTCGGAAATCATCAGCTTTTCAACAAAACAGCTCTCGGCATGGGGCGGTTCGTATAAACAGCTAAAAGAAGATGTTGACGGACTTTTTACCCCCGAAAGCAAGGGCGTTATATTTGCAGGAACAGAAAGAGCCGCCAAAAATCTTTGTGACACCTTTAACGCAGATGGTATAAACGCTGTTTACAGCGAGGGTGCGGATAAGATTTCAAAGGGCGAATTGCTTGTTATGCAGGGTGCATTGAGTGCGGGCTTTGAATATCCGTCACAAAAGTTTTTTGCAATAACCTACAGTCAGGTTTCGTACCGCCCCGAAAAGTCCAAAAAGAAGAAGAAAAGGACGGGACAGGAAATTTACAGTCTTTCCGAACTCGCCCCCGGTGATTATGTTGTACACAATGTTCACGGTATCGGTGTGTTCGGCGGTATAAGAAAAATTGATACTCACGGAGTTATAAAGGACTATATCAAGATTGACTACGCAAAGGGCGATGTGCTTTATGTGCCTGTCACACAACTTGATATGGTTGCAAAATATATAGGTCCGAAAGAGGATTCAAGGGTTAAGCTTAACCGACTCGGTTCGGGCGACTGGCAAAAGGCAAAGGCAAGGGTTAAAACCTCTGTCAAGGACATTGCCAAGGAGCTTATTGAGCTTTACTCACAGCGTATGAAAGCCAAGGGCTATGCCTTTTCGGCAGATAACGAGTGGCAGAGAGATTTTGAACTCAGCTTTGAGTATGACGAAACTCCCGACCAGCTGCGTTGTTGTGAGGAAATCAAGCATGACATGATGCGTTCGTCGCCGATGGACAGACTTCTCTGCGGTGATGTCGGATTCGGCAAAACAGAGGTTGCACTCCGTGCCGCCTTTAAGTGTATTGCAGATTCAAAGCAATGCGCATTGCTCTGCCCCACAACAATTCTCGCATGGCAGCATTATCAGACGGTAATCAAGCGTTTTGAGGGCTATCCCGTTCGTGTGGAACTGCTTTCAAGATTCCGTACCGCAAAACAGCAGAAAGAAATTCTCCAAAAGCTAAAGCGAGGAGAAATTGATATGATTGTCGGAACTCACAGACTTGTGCAGAAGGATGTTGAATTCCGTGACCTCGGACTTGCAATCATAGATGAGGAACAGCGTTTCGGCGTTGCTCAAAAGGAGAGGTTCAAGGAACTGTGCAAAAATGTCGATGTGCTTACGCTCTCGGCTACTCCAATTCCGAGAACCCTCAATATGGCGATGAGCGGTCTGCGTGATATGAGCGTTATCGAAGAAGCACCGACAAACCGTCAGCCTGTTCAGACCTATGTGCTTGAACACGATGATGCGGTTATCAACGAGGCAATCCGCCGTGAGCTCCGCCGTGGCGGTCAGGTGTTCTATCTTCACAACAATGTTGAAACAATTTCTTCATGTGCCGCAAAAATTCAGGAGGCTGTTCCCGAGGCAAAAATCGCAATCGGTCACGGCAAAATGAAAGAGGGCGAACTCAGCGAAGTTTGGCGACAGATGCTTGAACAGGAGATTGATGTGCTTGTCTGCACGACAATTATCGAAACGGGTGTCGATTTGCCGAATGCCAACACCCTTATTATAGAAAATGCCGACTGTATGGGACTTTCGCAGTTGCATCAGCTCAGAGGCCGTGTGGGCAGAAGTTCACGAAGGGCATATGCCTACTTTACTTTCAGACGGAACAAGGTTCTCACGGAGATTCAGCAGAAAAGGCTTGCCGCAATCAGGGAATTTACAGAATTCGGCAGCGGCTTCCGCATTGCAATGCGTGACCTTGAACTGCGAGGTGCGGGCAATATTATGGGCGCACAGCAGCACGGGCATATGGAATCGGTCGGTTACGATATGTACCTCAAGCTTCTTGATGAGGCAGTAAGCGAGGAAAAGGGCGAGCAGAATGTCACAAAAGACCTCGACTGTCTTATTGATATTTCGGTTGACGCTCATATTCCCGAAAGCTATGTTGAAAGTCTTACACTTCGTCTTGATGTTTACCGCAGAATTGCCGATATCCGCAGTAACGAGGACGCAGACGATGTTATTGACGAGCTGCAGGACAGATTCGGCAAGATTCCAAACTCGGTTCTCGGACTTATCGACATTGCCCTTGTGCGTAACAAGGCTTACTCAATGGGCATTTACGAAATCAGACAGAACGGCACAACACTTATGCTCTTTGTAAACGAACTCAAATCTCCTCAGGTTGCCGACTTGCTCATTGCTTTGGGCGGAAAGGCAAAGCTTGTTGCCGGAGCAAAACCGTGCGTTGCGGTTGAGTGCAAAAACAGCTCCGCTCCGCTTGAAATCCTCACCAAAATTTTCGGTGTGCAGTAA
PROTEIN sequence
Length: 1153
MNNLNFLVDVLKESPVFKTLEKNVKPGRTVCASGLSTINKSNIIYALCRLKGVMAFCLASDEKEAQTLCNDLSCMGLRAYVYPVRDFNFLDFQSRSHEYEHARLKVLLKLINHECDVAIACVDAAAQLTVPRNVLEQSVIEFEEGRELSLEKATKALTLLGYERFDAVEGSGQFSLRGGILDFFMPDSDYPVRCEFWGDEITDLSYFDIETQRRFKKADKITLSPSTEIVIEDRAALADKIEHKAKLLRSKNSAKAKEKLFSEAELIRSGAMIANADKFINQIYDKPESLFDYLDRNTLVFASEFTAIQERGKSMDFISNETLMQGFEDGTLCRGFDRFALTFNECTEFLQSHGTIVLENFVHGSMPIKLSEIISFSTKQLSAWGGSYKQLKEDVDGLFTPESKGVIFAGTERAAKNLCDTFNADGINAVYSEGADKISKGELLVMQGALSAGFEYPSQKFFAITYSQVSYRPEKSKKKKKRTGQEIYSLSELAPGDYVVHNVHGIGVFGGIRKIDTHGVIKDYIKIDYAKGDVLYVPVTQLDMVAKYIGPKEDSRVKLNRLGSGDWQKAKARVKTSVKDIAKELIELYSQRMKAKGYAFSADNEWQRDFELSFEYDETPDQLRCCEEIKHDMMRSSPMDRLLCGDVGFGKTEVALRAAFKCIADSKQCALLCPTTILAWQHYQTVIKRFEGYPVRVELLSRFRTAKQQKEILQKLKRGEIDMIVGTHRLVQKDVEFRDLGLAIIDEEQRFGVAQKERFKELCKNVDVLTLSATPIPRTLNMAMSGLRDMSVIEEAPTNRQPVQTYVLEHDDAVINEAIRRELRRGGQVFYLHNNVETISSCAAKIQEAVPEAKIAIGHGKMKEGELSEVWRQMLEQEIDVLVCTTIIETGVDLPNANTLIIENADCMGLSQLHQLRGRVGRSSRRAYAYFTFRRNKVLTEIQQKRLAAIREFTEFGSGFRIAMRDLELRGAGNIMGAQQHGHMESVGYDMYLKLLDEAVSEEKGEQNVTKDLDCLIDISVDAHIPESYVESLTLRLDVYRRIADIRSNEDADDVIDELQDRFGKIPNSVLGLIDIALVRNKAYSMGIYEIRQNGTTLMLFVNELKSPQVADLLIALGGKAKLVAGAKPCVAVECKNSSAPLEILTKIFGVQ*