ggKbase home page

L1_008_000M1_scaffold_25814_2

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 965..1294

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=2 Tax=Roseburia RepID=C7GAX2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 87.0
  • Bit_score: 114
  • Evalue 3.90e-23
Sigma-70 region 2 {ECO:0000313|EMBL:EEV01140.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 87.0
  • Bit_score: 114
  • Evalue 5.40e-23
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 82.0
  • Bit_score: 113
  • Evalue 3.20e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia intestinalis → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 330
ATGAACACCGAAACAGGAACGCGTTCTAAGAGGGGTGATACAATGGATAACTATCTACAACTGGTTGAAAGGGCCAGAAATAGGGATGCGCAGGCATTCGCAGCTTTGTATGCGCAGGTTTATCAGGATCTGTACCGGTTTGCGCTGTATACTCTGAAAAATACTCATGACGCGGAGGATATGGTCAGCGATACGGTGACGGATGCCTTTGCCTCTATACATAAATTGCGCAGCGCGGAGGCTTTTCGCGGCTGGATCTTTAAAATATTATCAAATGCCACATCTGACATTGTCTGGTTATCAAGCTTTCTTTTAAATATCATACAATAA
PROTEIN sequence
Length: 110
MNTETGTRSKRGDTMDNYLQLVERARNRDAQAFAALYAQVYQDLYRFALYTLKNTHDAEDMVSDTVTDAFASIHKLRSAEAFRGWIFKILSNATSDIVWLSSFLLNIIQ*