ggKbase home page

L1_008_000M1_scaffold_30370_2

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(866..1627)

Top 3 Functional Annotations

Value Algorithm Source
Alpha amylase, catalytic domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNP3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 254.0
  • Bit_score: 394
  • Evalue 7.60e-107
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFB76178.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 254.0
  • Bit_score: 394
  • Evalue 1.10e-106
Glycosidases similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 238.0
  • Bit_score: 288
  • Evalue 9.80e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
GGCGAGGACAAGCTGCTGCTGGGCGAAGTGTGGGAAGATGCGACGACGAAGGAAGCCTTTGGCCGCCGCCGCACCTACCTGCGCGGGCACGGTCTGGACGCCGTGATGAACTACCCGTTCCGCAGCGCCACGCTGGATTACCTGCACGGCGCGGACGTCACCGCCGTGGCCGACGCTCTGATGCAGATCTGCGAGCACTACCCTGCCCCGGCGCTGAACTGTGCGATGAATTTCCTGTCCACCCACGACACCGAGCGCGCCATCACGGCGATTGCGGGCGAGCCCTGCAACGGCCACGACCGCTACTGGCAGAGCAAGCGGGTCATTCCCTCCGGCCAGATGGACGAAGCCATCCGCAGGGAACTGCTGGGCTACGCGATGATCTTCACGCTGCCGGGCGTGCCCTGCGTCTACTACGGCGACGAGATTGCCATGCAGGGCTACCGCGACCCGTTCAACCGTGCGTTCTTTGACTGGAACTCCACCGAGCAGCGGCTGCGCGGCCCGATCAAGACGCTGACCGCCCTGCGCCGCAGCTGCGACGCCTTTGACGGCGGGCGGCTCGAGATCGTCCGTGCCGAGGGGGATATTCTCCACTACCGCCGCGTCGGCATTGTCCAGACGGCGGAGATCATCCTGAACCGCGGCCCGCATCTGATTGCCGAGGAAGCCTTCGGCAAGAACACCGAGGTCAACCCCGTGGAGAGCACAGCCGACACCATAAGCCCGCATATGTCGTTTATGTACTCCGTACGCTGGTAG
PROTEIN sequence
Length: 254
GEDKLLLGEVWEDATTKEAFGRRRTYLRGHGLDAVMNYPFRSATLDYLHGADVTAVADALMQICEHYPAPALNCAMNFLSTHDTERAITAIAGEPCNGHDRYWQSKRVIPSGQMDEAIRRELLGYAMIFTLPGVPCVYYGDEIAMQGYRDPFNRAFFDWNSTEQRLRGPIKTLTALRRSCDAFDGGRLEIVRAEGDILHYRRVGIVQTAEIILNRGPHLIAEEAFGKNTEVNPVESTADTISPHMSFMYSVRW*