ggKbase home page

L1_008_000M1_scaffold_36249_2

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 105..977

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein n=3 Tax=Subdoligranulum RepID=D1PJY7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 274.0
  • Bit_score: 402
  • Evalue 3.20e-109
Uncharacterized protein {ECO:0000313|EMBL:EHL64556.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 274.0
  • Bit_score: 402
  • Evalue 4.50e-109
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 278.0
  • Bit_score: 273
  • Evalue 4.90e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
GTGGAAAAATACCGCTGCGTCCAGATGTTACACCGTCATGGAACCACTGTGGAGCAGGCGTGCCGGATCTTGGAGGTCTCACGCAGCGGCTACTATAGCTGGGCAAATCGCAAACCCCGTGGGCGGGAACGGAGCAACCAGGCACTTCAGCGCAAACTGGCAGAGCTGCATCAGAAATACCCTGCCCTGGGACTGGACAGCCTCTACCATCTCTTGAAGCCGGAATTTGGCTGCTCCCGCAAGCGTGTCCACCGGCAGATGCAGCTTGCCGGGATTGCCTCAGTGCGGCGCCGGGCCTACAAAATCACCACCAACTCCCGACACAGCCATCCCATTGCGCCGAATCTACTGAAGCGAAACTTCTTTTTTGAGCAGCCGAACCAAGCCTGGGTGGGCGATATTACCTACATTCCCACGGGAGAAGGCTGGCTCTATCTGGCTATTGTCAAGGACCTGTGTACCCGCAAAATTGTGGGATATAGCTTTTCCAGCCGTATCGATACTACGCTGACGCTGGAAGCGCTGGACATGGCGGTACGCCGCAGCAATCCGCCTATGGGACTTATTTTTCACAGTGATCGGGGCGTCCAGTACACCGCACATGCCTTCCGGGATCGGCTGCAGTCCTATGGGATCCGTCAGAGTATGTCCCGCAAGGGCGATCCCTACGATAATGCCGTAGCAGAAAATTTCTTCAGCTGTCTGAAATGCGAACTCATTCACCTCAAGCAATATCCTACCCGAGCCAGCGCCCGGATCGATGTATTCGCCTACCTGGAGGCCTTCTACAACTCCGTACGGCCACATTCTGCATTGGGATGGCATTCTCCGGCGCAGTTTGAGGCCAGCCTTCTGACGCATCTGGCAGCTTGA
PROTEIN sequence
Length: 291
VEKYRCVQMLHRHGTTVEQACRILEVSRSGYYSWANRKPRGRERSNQALQRKLAELHQKYPALGLDSLYHLLKPEFGCSRKRVHRQMQLAGIASVRRRAYKITTNSRHSHPIAPNLLKRNFFFEQPNQAWVGDITYIPTGEGWLYLAIVKDLCTRKIVGYSFSSRIDTTLTLEALDMAVRRSNPPMGLIFHSDRGVQYTAHAFRDRLQSYGIRQSMSRKGDPYDNAVAENFFSCLKCELIHLKQYPTRASARIDVFAYLEAFYNSVRPHSALGWHSPAQFEASLLTHLAA*