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L1_008_000M1_scaffold_47872_1

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 3..560

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 172.0
  • Bit_score: 138
  • Evalue 5.90e-30
2'-5' RNA ligase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 172.0
  • Bit_score: 138
  • Evalue 4.20e-30
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 176.0
  • Bit_score: 115
  • Evalue 1.40e-23

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
TTTATTGCCATCCGTTTCAGTGAAGCTATCTTAGAAGCACTCTGGTATATAGAAAACCAGCTTTGCCAGCAGGCGTTATCTGGAAATTTTACACGGAAAGAGAATTTTCATTTGACCTTGTCCTTCTTGGGAGATGTTACAGAGGTGGATGCCATTCTACAGGTGATGGATCAGGTGAAATTGCCTGCTTTTCCTCTGCGATTAGAGGGGATAGGCTGTTTTTGCCAAGAAAAGGGCGGGGATATCCTTTGGGCTGGAGTCAGAGAGTCCCAGGGGCTCCGCCAACTGCAAAGTTTTTTAGAGCGTGCCTTGCGGCTCAAGGGGTTCCCGCTTGAGCAGAGGGGGTTTCAGCCGCACATCACCCTAGGAAGAAAGGTAAAATTGTGTGAAGGGTTTCCTTTAGCAGCGTTTTCTGCCACCATCCCCCCAGTGGATATGGAGGTTAGAAAGTTTTACCTGATGCGCTCCGACTCTCCACAGGGAATACTTACATATACGGAAATTTATGAGAGAGAGTTGGAGGGATTGCCAGGCCATTCATACGATTCCGACGAATAG
PROTEIN sequence
Length: 186
FIAIRFSEAILEALWYIENQLCQQALSGNFTRKENFHLTLSFLGDVTEVDAILQVMDQVKLPAFPLRLEGIGCFCQEKGGDILWAGVRESQGLRQLQSFLERALRLKGFPLEQRGFQPHITLGRKVKLCEGFPLAAFSATIPPVDMEVRKFYLMRSDSPQGILTYTEIYERELEGLPGHSYDSDE*