ggKbase home page

L1_008_000M1_scaffold_64243_2

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(257..604)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=root RepID=R5FBY5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 243
  • Evalue 7.60e-62
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCX98262.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 243
  • Evalue 1.10e-61
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 63.0
  • Bit_score: 66
  • Evalue 3.60e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium bolteae CAG:59 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 348
GTGGTAGGAGAAAGAATCAGATATTACAGAAAACGACAAAAAATGACACTCAGGGAACTGGGCGAGAAAAGTGGTTTTGAAAATAGAGGTGATGTAAGAATTGCCCAATACGAAAATGGTTCAAGAGTTCCAAAGACGGGAACGTTGAACAGGATTGCAAAGGCACTTGGTATTCCGCCAGAAGAATTATTCTGTGAGAACTGTAGAAAGTGCATGTTTCTCAAGAATTATTACAGAAAGAAAAGAAAATCTCATACCACTTTTGATATGGGAATCGAAGAAGACAACAGTTACAGAGAACACAATAATCCCGATGATGAAGGAATTTTATATGACAATTTAGATTAA
PROTEIN sequence
Length: 116
VVGERIRYYRKRQKMTLRELGEKSGFENRGDVRIAQYENGSRVPKTGTLNRIAKALGIPPEELFCENCRKCMFLKNYYRKKRKSHTTFDMGIEEDNSYREHNNPDDEGILYDNLD*