ggKbase home page

L1_008_000M1_scaffold_88512_3

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(931..1395)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IED3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 146.0
  • Bit_score: 164
  • Evalue 7.80e-38
RNA polymerase sigma factor {ECO:0000313|EMBL:CDE48942.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 146.0
  • Bit_score: 164
  • Evalue 1.10e-37
RNA polymerase sigma factor SigB similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 136.0
  • Bit_score: 102
  • Evalue 7.90e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Faecalibacterium sp. CAG:74 → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
CTGCGCATGAGCCGGGACAACCGCACCTTGCTCTTTCGCCTGCAAAAGACCCGGGATGAGCTGATCCAGCGGTTGCAGCGGGAGCCATCCATCCGTGAGCTGGCCCGGGCCATGGAACTGAGCGACGATGATTTGCTGGCGATGCTGGATGCCCGGGCCGCCTCCGAGGTGGTTTCCATGGACAGCGCGGTGGGCGATGAGGCCGACGGCGCTTCCCTGGGCGATTTTCTGGGCGAGACGGAGCGTGGTTATGAACGGGTGGAGGACCGTGCCTGGCTGGAATGGGTGTTTAGCCAGGTGACGCCCACGGAACGGCGGCTGCTGGAGCTGCGCTACATCCATCGTATGGGACAGCGGGAGACCGCGGCGCATCTGGGTGTGAGCCAGATGCAGGTGAGCCGCATGGAGCGGCGCATCCTGGCGCGGCTACGCCAAAGCGAAGAGAACCGGCAGGAACGTTCCTGA
PROTEIN sequence
Length: 155
LRMSRDNRTLLFRLQKTRDELIQRLQREPSIRELARAMELSDDDLLAMLDARAASEVVSMDSAVGDEADGASLGDFLGETERGYERVEDRAWLEWVFSQVTPTERRLLELRYIHRMGQRETAAHLGVSQMQVSRMERRILARLRQSEENRQERS*