ggKbase home page

L1_008_000M1_scaffold_50333_1

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(1..762)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 253.0
  • Bit_score: 231
  • Evalue 8.60e-58
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG30278.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 253.0
  • Bit_score: 231
  • Evalue 1.20e-57
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 256.0
  • Bit_score: 193
  • Evalue 4.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
ATGGCAACAGCAGTAAAACGAGGAGATAGCTATAAGATCACGGCCTCATGCGGCTACGACATCTCCGGCAAGCAGATCCGCAAGCACACCACATGGACGCCGCCGGTCGGGATGACTCCCCGCCAGATTGCGAAGGAGCTGGAGCGCCAGAAGGTATTATTCGAGGAGCGGGTAAACTCCGGCACTACGAAGGACGGAAACATCCGGTTCGAGGACTTCGCCGCAATCTGGATGAAGGACTTCGCTCAGAAGCAGCTCAAGATCAAGACATACACGGGCTACGAGAAAAGCCTCGAGCGGATCAATCAGGCCATAGGCCACATCAAGCTCAAAGATCTGCGCACCGGCCATCTCAACGAGTTTTACAGAAACCTCGAGGAGACCGGGATTCGGGCCGACCTGAAGTACACCAGCAAGATCGACATCGGCGAGGCCATTAAGCAGGCATGTGTCACGCGGACGGCCTTCGGGAAGGCGGCCGGAGTCGCGGGGAACACGCTGCGGATCGCCATCTCCGGTAAGAGGGTCAGCAAGGAAACGGCCATGGCGATCAGCGCGGAGCTCAGCCTGAAGCTCTCGGATGCCTTTAGGCTGGAGCAGCCCGATCGGCTGCTGTCTTCCAATACTGTCCGTTCCTACCATCGGATCATCAGCTCGTGCCTCGGGAAGGCGGTCAAATGGGGCTACATCCCCTATAATCCGGCCGTCAACGCCGAACTGCCGAAGATGCCGAAGCACGAGGCGGCATATCTGGACGAGGCA
PROTEIN sequence
Length: 254
MATAVKRGDSYKITASCGYDISGKQIRKHTTWTPPVGMTPRQIAKELERQKVLFEERVNSGTTKDGNIRFEDFAAIWMKDFAQKQLKIKTYTGYEKSLERINQAIGHIKLKDLRTGHLNEFYRNLEETGIRADLKYTSKIDIGEAIKQACVTRTAFGKAAGVAGNTLRIAISGKRVSKETAMAISAELSLKLSDAFRLEQPDRLLSSNTVRSYHRIISSCLGKAVKWGYIPYNPAVNAELPKMPKHEAAYLDEA