ggKbase home page

L1_008_000M1_scaffold_55290_2

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 371..1024

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 216.0
  • Bit_score: 247
  • Evalue 1.10e-62
Pseudouridylate synthase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V9G6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 216.0
  • Bit_score: 247
  • Evalue 7.60e-63
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 224.0
  • Bit_score: 234
  • Evalue 1.90e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:227 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 654
GTGAAAAAGCTCATCGTCGGCACGAAAGAAAGCGGCCAGCGACTGGATAAATATCTGGGGAAAACCCTCAGTGAAGCACCGAAAAGTTTTATTTACAAGATGCTTCGAAAGAAAAACATTACATTAAATGACAAAAAGGCAGACGGCAGCGAAAAGTTGAATGTTGGGGATACAGTCACATTCTGGCTGTCTGATGAAACTTTTGATAAATTTAAAGGTGTCGTAGAGAATATGTCGGCAAAACGATTGCCGAAACCGGAGATTATTTATGAAGATAATCAGATTATTATTATGAACAAGGCACCGGGGGTGCTGTCCCAGAAAGCGGCACCGGAGGATGTGTCCATCAATGAAATGATGATCGGGTGGCTCTTGGAGAGCGGACAGCTCACGAAAGAGATGCTTCAGACCTTTGATCCGTCGGTCTGCAATCGACTGGACCGCAACACAAGCGGACTGATCACCGGCGGCAAGACACTGGCAGCTTTGCAGTTCCTGTCAGAGGGCTTTCGTGATCGTACCATTCACAAATACTATTTCTGTATTGTTGCAGGGAAAGTTACTGAGAAGGTCAGACTTCATGGATATCTGCACAAAGATGAGGCTTCCAATCAGGTAACCATCACAAAAGAAGCCAGACATCAGGCGGATTAT
PROTEIN sequence
Length: 218
VKKLIVGTKESGQRLDKYLGKTLSEAPKSFIYKMLRKKNITLNDKKADGSEKLNVGDTVTFWLSDETFDKFKGVVENMSAKRLPKPEIIYEDNQIIIMNKAPGVLSQKAAPEDVSINEMMIGWLLESGQLTKEMLQTFDPSVCNRLDRNTSGLITGGKTLAALQFLSEGFRDRTIHKYYFCIVAGKVTEKVRLHGYLHKDEASNQVTITKEARHQADY