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L1_008_000M1_scaffold_1833

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1833_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..123)
DNA (123bp) protein (41aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5)
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CBL02690.1}; EC=2.7.1.5 {ECO:0000313|EMBL:CBL02690.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Sugar (Pentulose and hexulose) kinases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCX7_9FIRM
L1_008_000M1_scaffold_1833_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(86..1801)
DNA (1716bp) protein (572aa)
Membrane carboxypeptidase (penicillin-binding protein) (EC:2.4.1.- 3.4.-.-)
Transglycosylase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6S1_9CLOT
Transglycosylase {ECO:0000313|EMBL:EJF42559.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_1833_3
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1854..2231
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037AF923
Uncharacterized protein {ECO:0000313|EMBL:CDB24663.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
L1_008_000M1_scaffold_1833_4
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2282..2578)
DNA (297bp) protein (99aa)
Small acid-soluble spore protein alpha/beta type n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QEN2_9FIRM
Small acid-soluble spore protein alpha/beta type {ECO:0000313|EMBL:CCZ20726.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
small acid-soluble spore protein
L1_008_000M1_scaffold_1833_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2568..3110)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000382B184
Uncharacterized protein {ECO:0000313|EMBL:EJF42584.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_1833_6
unknown

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comp(3212..3442)
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_000M1_scaffold_1833_7
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3531..4283
DNA (753bp) protein (251aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NM37_9FIRM
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDF14489.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_1833_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4309..6228)
DNA (1920bp) protein (640aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000381C2E6
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EJF42112.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
polysaccharide biosynthesis protein CapD
L1_008_000M1_scaffold_1833_9
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(6610..7698)
DNA (1089bp) protein (363aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CUL8_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CCX71528.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Crp/Fnr family transcriptional regulator
L1_008_000M1_scaffold_1833_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7893..8960)
DNA (1068bp) protein (356aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHX2_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EDS09090.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_008_000M1_scaffold_1833_11
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8967..9749)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIS2_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35557.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_1833_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9784..10923)
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHX4_9FIRM
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EDS09092.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_008_000M1_scaffold_1833_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11097..11936)
DNA (840bp) protein (280aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase NAD binding domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPM5_9FIRM
3-hydroxyacyl-CoA dehydrogenase NAD binding domain protein {ECO:0000313|EMBL:CDD35815.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1833_14
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(12033..12809)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PU53_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26203.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
3-hydroxybutyryl-CoA dehydratase
L1_008_000M1_scaffold_1833_15
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12847..14031)
DNA (1185bp) protein (395aa)
Acetyl-CoA C-acetyltransferase n=1 Tax=Eubacterium sp. 14-2 RepID=S0J6L0_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EOT24245.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
acetyl-CoA acetyltransferase
L1_008_000M1_scaffold_1833_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14373..15473)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38708.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
uncharacterized Fe-S center protein
L1_008_000M1_scaffold_1833_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15729..16553)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78988.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
EDD domain protein, DegV family
L1_008_000M1_scaffold_1833_18
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16550..17326)
DNA (777bp) protein (259aa)
accA; acetyl-coenzyme A carboxylase, subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJC7_ACEWD
L1_008_000M1_scaffold_1833_19
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17313..18191)
DNA (879bp) protein (293aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
accD; acetyl-coenzyme A carboxylase, subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Clostridium sp. CAG:169 RepID=R6BRC5_9CLOT
L1_008_000M1_scaffold_1833_20
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(18195..18770)
DNA (576bp) protein (192aa)
Acetyl-CoA carboxylase, biotin carboxylase id=2753552 bin=GWF2_Clostridiales_36_10 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
acetyl-CoA carboxylase, biotin carboxylase
Tax=GWF2_Clostridiales_36_10_curated
Displaying 20 items

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