ggKbase home page

L1_008_000M1_scaffold_1826_11

Organism: dasL1_008_000M1_concoct_10_sub_fa

near complete RP 46 / 55 MC: 8 BSCG 50 / 51 MC: 7 ASCG 14 / 38 MC: 3
Location: comp(7914..8270)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAG1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 105.0
  • Bit_score: 103
  • Evalue 1.30e-19
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS11553.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 105.0
  • Bit_score: 103
  • Evalue 1.80e-19
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 112.0
  • Bit_score: 99
  • Evalue 6.70e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaerotruncus colihominis → Anaerotruncus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGTTTTACGATTACTTCAGTTCTCTTTGCAGGCGAAAGGGCGTCAGCGAATCCCATGCAGCGGAAGAAATCGGGCTTTCGCGCTCCACCGTAAACAAATGGAAAAAGGGTTCGATGCCAAGCGGTGCAACGCTGCAGAGGCTTGCAGCTTATTTCGGTGTGTCGGCCGACAATCTCCTGCGGGGCAATGAACCGGAGGAAACACAGGATATATCGTTCGACGCGTTTACCTACGCGCTCCACAACGAAACCAAGGAGCTGACCCCTGAGAATAAGCAAAAGCTCCTGGAGCTTGCACGTTTTTTCAAGCAGGAGCAGGAAAAAGAATGTATCCGGCCCGGCGACGGTGAGCTCTGA
PROTEIN sequence
Length: 119
MFYDYFSSLCRRKGVSESHAAEEIGLSRSTVNKWKKGSMPSGATLQRLAAYFGVSADNLLRGNEPEETQDISFDAFTYALHNETKELTPENKQKLLELARFFKQEQEKECIRPGDGEL*