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L1_008_000M1_scaffold_2122

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2122_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37..1209)
DNA (1173bp) protein (391aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6J7_9CLOT
L1_008_000M1_scaffold_2122_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1552..3024
DNA (1473bp) protein (491aa)
Iron-sulfur cluster-binding protein, Rieske family n=1 Tax=Clostridium sp. D5 RepID=F0YXZ5_9CLOT
Iron-sulfur cluster-binding protein, Rieske family {ECO:0000313|EMBL:EGB93097.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
iron-sulfur cluster-binding protein, rieske family
L1_008_000M1_scaffold_2122_3
unknown

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comp(3328..3525)
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_2122_4
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3639..3965
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. P22 RepID=T2LML3_9BACL
DNA-binding protein {ECO:0000313|EMBL:KKC46033.1}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_2122_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4029..5033)
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
trpS; Tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEH0_9CLOT
L1_008_000M1_scaffold_2122_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5148..6809
DNA (1662bp) protein (554aa)
DNA polymerase III subunits gamma and tau n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2K3_9CLOT
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:CCX49815.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DNA polymerase III subunits gamma and tau
L1_008_000M1_scaffold_2122_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6935..7135
DNA (201bp) protein (67aa)
Nucleoid-associated protein BN545_01243 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6G7_9CLOT
Nucleoid-associated protein BN545_01243 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_2122_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7280..7873
DNA (594bp) protein (198aa)
Recombination protein RecR n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3E7_9CLOT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Recombination protein recR
L1_008_000M1_scaffold_2122_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8028..9011
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49812.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_2122_10
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9175..9525
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AT74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42391.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_2122_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9522..10727
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51107.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Putative Na(+)/H(+) antiporter protein
L1_008_000M1_scaffold_2122_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10796..12142)
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4X5_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_2122_13
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12590..13909)
DNA (1320bp) protein (440aa)
galactokinase (EC:2.7.1.6)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63903.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L1_008_000M1_scaffold_2122_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(13930..14454)
DNA (525bp) protein (175aa)
Methyltransferase domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISD7_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CCY39626.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
methyltransferase
L1_008_000M1_scaffold_2122_15
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14448..15338)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9K107_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37182.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_2122_16
unknown

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16065..16289
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 16 items

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