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L1_008_000M1_scaffold_671_21

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(20658..21932)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:413 RepID=R6NNG9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 427.0
  • Bit_score: 530
  • Evalue 8.80e-148
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 427.0
  • Bit_score: 530
  • Evalue 1.20e-147
sigma-70 region 2 similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 144.0
  • Bit_score: 87
  • Evalue 7.30e-15

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Taxonomy

Clostridium sp. CAG:413 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1275
ATGGGCGAGGAATTTGAAACGTTATTTTGTGGTTGTAAGGGAGCTGTGGAGAGATTCGTCCGCTTTCGGATGCCTTCTGCGGCTGATGCGGACGACATCTTGCAGGAAGTATACCTGACGGCATATCGCCGGTTTGATACGTTGCGCGATAAGAATTCGATGAGAGCATGGATGCTTAGCATCGCGCGTAACAAATGCAAAGATTTTTTTCGTGAGCGCGCGAAAATGTTGGAGATCCCGTTGAGCGAATTCGAGGAAGCTGCACTGCCTGACAGCCGCTTTGGGCCGAGCGAGGCAGACGCTGTGAATGAAACGCTGGAACGGCTTGGCGATTGGGAGAAGCAGATTTTGCATCTGTATTATTTCAAGATGCTGCCACAGACGGAAATCGCGCGACAGCTCGGAGTGCCGCTTGGCACGGTGAAAAGCCGCCTATATGCCGCAAAGGCACGTTTCAAACAAAGCTACCCATATCCGCCGCTGAAATCGAAAGGAGTACCGAAAATGAAAAAACTGCCTGAGCTTATGCCTGAATATAAGATCGTGCCATCCGGGAAAGAGCCATTTTCTGTAAAATGGGAAGAGATCATGGGGTGGTTTTTGATCCCGCGGTTGGGAGAAAAGCTTTCCTGGGGAATGTATGATATGCCTTCCCGTGCATGCAGTCATGTTTATGACATGGCGGTAACCGGTAGGGCCGAGGTGCATGGCATCGAAGGTGTAGAGTTGACAGCGCGGGAATCACAATATTCAGGGAAAAAGGAGACCATTAACCGAACTTTCGTTGCACAGCTTACGGATACGCACTGCCGCATCCTCGCTTCGTTTCGCACGGTCGATGGCGTGCGAAAGTATATCACTTTTCTCGATGAGGATGCGTTCCTACCATCATGGGGCTTTGGAGATGATAACTGCGGCAACGAAACGAACCTTGTGCCTAAGGGGGATATCCTGCGTGAAGGGAACCGGGTCACAACAGCGAAAAAAAGCTGGCTTCTGGATATTGCTGGCCGTTACACAGTTACCATCGGCGGCAAAACATATGATACCGTGTGCGTGATGGATGTGGAGACGTATAATACTGGCGTTGTGAGCGAGCAATTCCTTGATGAAAATGGGCGGACCATCCTTTGGCGACGCTTCAACCGGGACGACTGGCGGCTTGCACAGTATGAAAAACTGTGGTCGGAACAGCTGCCGGAAAACGACCGGCTGATTGTGAACGGAGTGACATATGTACAGTGGTATGATTGCATTACGGATTACATTCTCTGA
PROTEIN sequence
Length: 425
MGEEFETLFCGCKGAVERFVRFRMPSAADADDILQEVYLTAYRRFDTLRDKNSMRAWMLSIARNKCKDFFRERAKMLEIPLSEFEEAALPDSRFGPSEADAVNETLERLGDWEKQILHLYYFKMLPQTEIARQLGVPLGTVKSRLYAAKARFKQSYPYPPLKSKGVPKMKKLPELMPEYKIVPSGKEPFSVKWEEIMGWFLIPRLGEKLSWGMYDMPSRACSHVYDMAVTGRAEVHGIEGVELTARESQYSGKKETINRTFVAQLTDTHCRILASFRTVDGVRKYITFLDEDAFLPSWGFGDDNCGNETNLVPKGDILREGNRVTTAKKSWLLDIAGRYTVTIGGKTYDTVCVMDVETYNTGVVSEQFLDENGRTILWRRFNRDDWRLAQYEKLWSEQLPENDRLIVNGVTYVQWYDCITDYIL*