ggKbase home page

L1_008_000M1_scaffold_5920_5

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 5564..6286

Top 3 Functional Annotations

Value Algorithm Source
exoA; apurinic/apyrimidinic endonuclease (EC:3.1.11.2) similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 241.0
  • Bit_score: 341
  • Evalue 1.20e-91
Exodeoxyribonuclease III Xth n=1 Tax=Clostridium sp. CAG:226 RepID=R5B603_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 240.0
  • Bit_score: 389
  • Evalue 2.30e-105
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:CCX50713.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 240.0
  • Bit_score: 389
  • Evalue 3.30e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 723
ATGCGCTTTGTATCATGGAATGTAAACGGCCTTCGTGCCTGTCTGGGGAAAGGGTTTGAAGAATTTTTCCGCATCATCGATGCGGATATAGTCGCCCTGCAGGAGACAAAGCTTCAACCGCACCAAATCGAGCTTGCGTTTGAGGGCTACGAGCAGTATTGGCACAGCGCCGTGAAGAAGGGATATTCCGGCACGGCGGTGTTCACACGCATCCCGCCGCTTGCGGTCAGCTATGGCCTGCCGGATGAGGCGGAGCTCGGCTTCGCGCCGGAAGGGCGCGTGATCACGCTGGAATTTGAGACGTTCTATTTTGTGACGTGCTACACGCCCAACGCCCAGCGGGAACTGACCCGCCTTTCCTACCGGATGGACTGGGAGGACGCTTTCCGTGCATACTTGAAATCGCTCGACGCAAAGAAGCCCGTTGTCATCTGCGGCGACCTGAACGTGGCATATCAGGAGATAGATCTAAAAAATGCAAAATCCAACCGCGGCAACGCGGGCTTCACGGATGAGGAGCGCGCAAAGTTCACGGAGCTTCTCGCCAGCGGCTTTGTGGATACGTTCCGCTACCTGTATCCGGACAAGACCGGCGCCTATTCCTGGTGGAGCTACATGTACAATGCCCGGGCCAATAACGCGGGGTGGCGCATCGACTATTTCCTTGTAAGCGAGCGCATCCGCGGCTGCATTGAAGAAAGCAGCATTCTGCCGGAGGTCATG
PROTEIN sequence
Length: 241
MRFVSWNVNGLRACLGKGFEEFFRIIDADIVALQETKLQPHQIELAFEGYEQYWHSAVKKGYSGTAVFTRIPPLAVSYGLPDEAELGFAPEGRVITLEFETFYFVTCYTPNAQRELTRLSYRMDWEDAFRAYLKSLDAKKPVVICGDLNVAYQEIDLKNAKSNRGNAGFTDEERAKFTELLASGFVDTFRYLYPDKTGAYSWWSYMYNARANNAGWRIDYFLVSERIRGCIEESSILPEVM