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L1_008_000M1_scaffold_5315_1

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 2..1651

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 569.0
  • Bit_score: 787
  • Evalue 9.40e-225
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:226 RepID=R5B519_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 569.0
  • Bit_score: 787
  • Evalue 6.70e-225
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 525.0
  • Bit_score: 570
  • Evalue 2.80e-160

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1650
GCACCACAGGCGCAGCATGTACCCCAGCCTGCGCCAATCACCGAAGACGGGCCGGCGGCATATGAGCAGCGCACACGTTACCCGCAGCAGCCGCAATATCGCGCGCCGCGGCAGGAGTATCAGCAAGGCGGATACAATCGCAGGCAATATAACCAAAGCTATGCGCCCCAGCAGGGCCGCCCTTATGGCGGATACAACAGCCAAAACCGCGATACCGGTTACCAGAGCGGATATAACCGCCGTCAGGAAGGGTATCAGGGATACCAGAACACGGGGTATCAGGGCGGGTATCGCCAGGATTACAACCGCACAAATGATTACCGTGAAAATTACCGCGCGCCGCAGGAGACATATCAGCCCCGCGAAAGCTATGTGCCGCAATACGAGGGCGAAGACGGATACCGTCAACAAAAGCCGGAGGGATACTACAATAAGGAATACGGCACAAGCAATCCCGCTGTGCCCGAACTGCTGGAAGGCGGAGCCTGCGGCGATTGCGAAGGCGTGCTCGAAGTTCTGCCGGACGGGTACGGCTTCCTCCGTTCGGAAAACTATCTGCCCGGGAACCGGGACGTTTACGTTTCCATTGCGCAGATTCGCCGCTTTAGCCTGAAAACCGGCGACCTTGTTACAGGGAAAACGCGCCCTTCCAAGGAGGGAGAGCGCTTTCTTGCTTTGCTTTATATCACGGCCGTCAATGGGGAAGAACCGGAAAAGGCGCAGACGCGCAAGCCCTTTGAAGAGCTTGTGCCGATTTATCCCAACGAGCGCATCACGCTGGAATCCCCGGGCCTTGGGCATGACCAGAACCTTGCCATCCGCCTGATCGACCTGATAGCGCCCATCGGCAAAGGCCAGCGCGGCATGATCGTCAGCCAGCCGAAGTCCGGTAAAACAACGCTTTTAAAGAATATTGCGCACGGCATTTCCAACAACTACCCGGACGTGCACCTGATCGTGCTGCTTATCGACGAGCGGCCGGAGGAAGTGACGGATATGCAGCGTTCTATCAAGGGCGAGGTGCTTTATTCCACGTTTGACGAGCTGCCCGAGCATCACACCCGCGTAGCCGAGATGACACAGGAACGCGCCATGCGCCTTGTTGAGCAGGGCAAGGATGTTGTGGTGCTGATGGACTCTATCACGCGCCTTGCACGGGCGTACAACCTCACCATCCCGGCAACGGGAAAAACGCTTTCCGGCGGCATGGACCCGGGCGCGCTGCATAAGCCCAAGCGGTTCTTTGGCGCTGCGCGCAACATTGAAAATGGCGGCAGCCTTACAATTATCGCCACGGCGCTGATAGAGACCGGCAGCCGGATGGACGACATCGTTTATGAAGAGTTCAAGGGCACGGGCAACATGGAAATTCACCTGGACCGCAAGATGAGCGAAAAGCGCATTTTCCCTGCCATTGACATTTATAAATCCGGCACACGCCGCGAGGAACTGCTGCTCACCAAGGAGGAGCTTGATGCCGTGTTCACCATGCGCCGCACGCTTGCAGCCGGCAATCCGGCCGAGGTGACGGAGCAAATGATCAACATGCTGGATAAGACCGCCACCAACGAGGAATTCATTCAGCGCCTGACCTCCTGGAACAAGATCTATGAAAAGGACGGTTACTCTGCAGGCAAGCGCATCAACTAA
PROTEIN sequence
Length: 550
APQAQHVPQPAPITEDGPAAYEQRTRYPQQPQYRAPRQEYQQGGYNRRQYNQSYAPQQGRPYGGYNSQNRDTGYQSGYNRRQEGYQGYQNTGYQGGYRQDYNRTNDYRENYRAPQETYQPRESYVPQYEGEDGYRQQKPEGYYNKEYGTSNPAVPELLEGGACGDCEGVLEVLPDGYGFLRSENYLPGNRDVYVSIAQIRRFSLKTGDLVTGKTRPSKEGERFLALLYITAVNGEEPEKAQTRKPFEELVPIYPNERITLESPGLGHDQNLAIRLIDLIAPIGKGQRGMIVSQPKSGKTTLLKNIAHGISNNYPDVHLIVLLIDERPEEVTDMQRSIKGEVLYSTFDELPEHHTRVAEMTQERAMRLVEQGKDVVVLMDSITRLARAYNLTIPATGKTLSGGMDPGALHKPKRFFGAARNIENGGSLTIIATALIETGSRMDDIVYEEFKGTGNMEIHLDRKMSEKRIFPAIDIYKSGTRREELLLTKEELDAVFTMRRTLAAGNPAEVTEQMINMLDKTATNEEFIQRLTSWNKIYEKDGYSAGKRIN*