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L1_008_000M1_scaffold_14480_1

Organism: dasL1_008_000M1_concoct_27_fa

near complete RP 43 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(3..731)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2F8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 243.0
  • Bit_score: 381
  • Evalue 4.90e-103
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 243.0
  • Bit_score: 381
  • Evalue 6.90e-103
RNA polymerase sigma subunit RpsG/SigG similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 243.0
  • Bit_score: 352
  • Evalue 6.90e-95

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Taxonomy

Clostridium sp. CAG:226 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 729
ATGGCGTTGAACAAAGTCGATATCTGCGGCATGGATACATCCAAGCTCCCTATGATGACGCATAAGCGCAGCAGGGAGCTTCTTGTACGCATCAAGGAGGGGGACACCGGCGCGCGGGAAGAATTCATACAGGGCAATTTGCGCCTTGTGCTCAGCGTAATTCAGCGGTTTTCCGGCCGGGGCGAACAGATGGACGATCTGTTTCAGGTTGGGTGTATCGGCCTGATTAAAGCGATTGACAACTTCAACCTTGCGCTTGACGTGCGCTTTTCAACCTATGCCGTTCCGATGATTATCGGCGAGCTCCGGCGGTACCTTCGGGATAATACTGCCATGCGCGTAAGCCGTTCCCTGCGCGATATGGCGTACAAAGCGCTGCAGATGCGCAATAAACTCATGGAGGAGAATGCGCGCGAGCCCAGTATCGGCGAGATTGCAAAGGCGCTTGAAATGAAGGAAGAGGACGTGGTGTTTGCGCTTGATGCGATTCAGGATCCCATTTCCCTGTTTGAGCCGATCTATCACGATGACGGCGATGCGATCTACGTCATGGATCAAGTGCGTGACGAACGCAGTTCGGATGATCTTTGGCTGGATGGGATTGCCATTGAGGGTGGCTTGGATAAGCTTGGCGAGCGTGAACGGCGCATTATCGAATTGCGTTTTTTCCATGGCAGGACGCAGATGGAAGTTGCCTCCGAGACCGGGATCAGCCAGGCGCAGGTATCG
PROTEIN sequence
Length: 243
MALNKVDICGMDTSKLPMMTHKRSRELLVRIKEGDTGAREEFIQGNLRLVLSVIQRFSGRGEQMDDLFQVGCIGLIKAIDNFNLALDVRFSTYAVPMIIGELRRYLRDNTAMRVSRSLRDMAYKALQMRNKLMEENAREPSIGEIAKALEMKEEDVVFALDAIQDPISLFEPIYHDDGDAIYVMDQVRDERSSDDLWLDGIAIEGGLDKLGERERRIIELRFFHGRTQMEVASETGISQAQVS