ggKbase home page

L1_008_000M1_scaffold_989_18

Organism: dasL1_008_000M1_concoct_51_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 19868..20488

Top 3 Functional Annotations

Value Algorithm Source
lysM; peptidoglycan-binding LysM (EC:3.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 196.0
  • Bit_score: 129
  • Evalue 8.10e-28
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AFS77421.1}; EC=3.2.1.- {ECO:0000313|EMBL:AFS77421.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 196.0
  • Bit_score: 129
  • Evalue 4.00e-27
Peptidoglycan-binding LysM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYG8_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 196.0
  • Bit_score: 129
  • Evalue 2.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
ATGGATCAAATCAACGCAACCATGACGGAAAACGAGCTGATTAACCAGACGGCGCTTGAGCCGGATACCGGCGCATGTCCGGCGGGCAGCGAAACCTACCGCGTGCAGCGCGGCGATAGTTTTTATCTGATTGCCCGCAAGTTTGGCATCAGCGTGCGCGCCCTGATGAATGCCAACCCGAATATCGCGGCGGGGCATCTGCTGGTGGGCGATATCCTCTGCGTGCCGGTGGGCGAGGGGCGTTCCTGCCCGGTGGGTTCTTCTGCGTACACCGTGCAGCAGGGGCAGAGCGTTGTGGATGTCATGCTTTCTTCCAACGTTTCTCTCCGGGCGCTTCGGGAGTATAACGAGGATATCCGGCTGACGGCGCTTCGGCCGGGCGACGTGCTGTGTGTGCCGCCCAGCGGAGACAGAGGGCTCTGCGAAAACGGCGGGCCGGTTTACCGCTTGCAGGAAGGCGACACGCTGGATGAGATCGCCGAACGCAACGGCACGAATGTTGAACAGCTGCTGCGGCTTAATCCCAATCTGCTGCCCAGCGATTTTGTGAGCGGGCAGGTGATCTGTCTGCCGACAAGGCGGCGCGTAACCGAGGAAAACACGGAAGAACAGGAAACCTGA
PROTEIN sequence
Length: 207
MDQINATMTENELINQTALEPDTGACPAGSETYRVQRGDSFYLIARKFGISVRALMNANPNIAAGHLLVGDILCVPVGEGRSCPVGSSAYTVQQGQSVVDVMLSSNVSLRALREYNEDIRLTALRPGDVLCVPPSGDRGLCENGGPVYRLQEGDTLDEIAERNGTNVEQLLRLNPNLLPSDFVSGQVICLPTRRRVTEENTEEQET*