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L1_008_000M1_scaffold_2216_13

Organism: dasL1_008_000M1_concoct_51_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 9029..9550

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY79_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 172.0
  • Bit_score: 133
  • Evalue 1.30e-28
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHL64792.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 172.0
  • Bit_score: 133
  • Evalue 1.80e-28
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 160.0
  • Bit_score: 127
  • Evalue 2.00e-27

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Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 522
GTGCAACATGCCGCGATTTCGCGCGCGGAAAAAGACGAATGGCTCAGCGAGCTGATGCAGACCTACGGCGACGACATTCTCCGCCTGTGCTACGTCATTTTGCAGGATCGCACTTTGGCCGAGGACGCGTCGCAGGAGGTTTTTCTGAAAGCCTACAAGCGCCTGCACACGCTGCGCCAGCGCGAATACGCCAAAACGTGGCTGGTTTCTATCGCCGTCAACACCTGCCGGGATCAGCTTCGCGCGTCGTGGCTGCGCCACACGGACAGGAGCGTTTCGCTCGACAATCTGCCGCCCGCCGCCTGTGAATTTGACGAGCGGGACGACAGCGTGCTGCGCGAGGTGATGGCGCTTGAACCCAAATACCGCGAAGTGCTGCTGCTTCACTATTATCAAAACATGAACGCCGCCGAATGCGCACACGCGCTGCATATGACGACGTCCGGCTTTTACCGCCGACTGAAAAAGGCGCAGGCGCGCCTCAAGCCGGAGTTGGAAAGGTGGGGTCTTGATGAACGATAA
PROTEIN sequence
Length: 174
VQHAAISRAEKDEWLSELMQTYGDDILRLCYVILQDRTLAEDASQEVFLKAYKRLHTLRQREYAKTWLVSIAVNTCRDQLRASWLRHTDRSVSLDNLPPAACEFDERDDSVLREVMALEPKYREVLLLHYYQNMNAAECAHALHMTTSGFYRRLKKAQARLKPELERWGLDER*