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L1_008_000M1_scaffold_4481

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4481_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(258..1679)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
pykA; pyruvate kinase PykA (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9Y7_9FIRM
L1_008_000M1_scaffold_4481_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(1693..3156)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21537.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Arginine/lysine/ornithine decarboxylases
L1_008_000M1_scaffold_4481_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(3134..3712)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21538.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
HD domain-containing protein
L1_008_000M1_scaffold_4481_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(3879..4310)
DNA (432bp) protein (144aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0H6_9FIRM
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CCY21539.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
transcriptional regulator, BadM/Rrf2 family
L1_008_000M1_scaffold_4481_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(4329..4529)
DNA (201bp) protein (67aa)
Cof-like hydrolase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW27_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCY21540.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_4481_6
unknown

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comp(4484..4651)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_008_000M1_scaffold_4481_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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4943..5572
DNA (630bp) protein (210aa)
Uncharacterized conserved protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9Z1_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY21541.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L1_008_000M1_scaffold_4481_8
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5792..6424)
DNA (633bp) protein (211aa)
Integral membrane protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WGT3_9FIRM
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:CQR54053.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L1_008_000M1_scaffold_4481_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(6437..8449)
DNA (2013bp) protein (671aa)
Glycosidases (EC:3.2.1.20)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21542.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_4481_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(8744..10579)
DNA (1836bp) protein (612aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWH6_9FIRM
hypothetical protein
L1_008_000M1_scaffold_4481_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(10608..11132)
DNA (525bp) protein (175aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0H9_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCY21544.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_4481_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(11160..12839)
DNA (1680bp) protein (560aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW30_9FIRM
L1_008_000M1_scaffold_4481_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(13097..14314)
DNA (1218bp) protein (406aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E (SpoIIE) n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9Z4_9FIRM
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CCY21546.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_4481_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(14740..15051)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H590_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23224.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
divIC; septum formation initiator DivIC
L1_008_000M1_scaffold_4481_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(15569..15859)
DNA (291bp) protein (97aa)
Sporulation protein YabP n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0M8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CCY23225.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L1_008_000M1_scaffold_4481_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(15919..16158)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23226.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000M1_scaffold_4481_17
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(16285..16557)
DNA (273bp) protein (91aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEC7_9FIRM
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CCY23227.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Bacterial nucleoid DNA-binding protein
L1_008_000M1_scaffold_4481_18
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(16671..17660)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H170_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23228.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
CotS family spore coat protein
L1_008_000M1_scaffold_4481_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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17818..19065
DNA (1248bp) protein (416aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0N4_9FIRM
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:CCY23230.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
N-acyl-D-glucosamine 2-epimerase
L1_008_000M1_scaffold_4481_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(19169..20524)
DNA (1356bp) protein (452aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.4.- 3.1.3.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23231.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_4481_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20933..21175
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58481.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Displaying 21 items

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