ggKbase home page

L1_008_000M1_scaffold_3959_1

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(363..602)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Desulfitobacterium hafniense RepID=UPI000378DDDE similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 77.0
  • Bit_score: 71
  • Evalue 3.50e-10
RNA polymerase sigma factor {ECO:0000313|EMBL:KJJ68611.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 77.0
  • Bit_score: 74
  • Evalue 4.50e-11
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 78.0
  • Bit_score: 71
  • Evalue 1.00e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. FS41 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 240
ATGCTGACAGACACGGCATCCGATGAACCGGAAGATATCGTGATTGCAAAGCTTATGACCGAAAAGCTGCATTCCTGCATCGCAAAGCTCACGAACGATGAACGGCAGCTTATCTATATGCTTTTCTTCGACGGCTGCAGCGAACGGGAAACGGCTAAAAAATTCGGCATTCCGCTCATGACATTGCACAACAAGAAAGATGCGACTTTGGCGAAATTGCTGAAATTTTTGAAAACTTGA
PROTEIN sequence
Length: 80
MLTDTASDEPEDIVIAKLMTEKLHSCIAKLTNDERQLIYMLFFDGCSERETAKKFGIPLMTLHNKKDATLAKLLKFLKT*