ggKbase home page

L1_008_000M1_scaffold_3331_16

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(15927..16760)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 278.0
  • Bit_score: 339
  • Evalue 4.50e-90
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 278.0
  • Bit_score: 327
  • Evalue 2.10e-87
Diaminopimelate epimerase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6W5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 278.0
  • Bit_score: 339
  • Evalue 3.20e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oscillibacter sp. 1-3 → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 834
ATGCGGTTTACGAAAATGAACGGCGCTGGCAATGATTTTATTCTTGTGGAAAATCTGCACGGCGAGCTGACGCAGCAGCAGCTGTCAAAGCTTGCGCGCACGCTCTGCGACCGCCGCATGTCTATCGGCGCGGACGGTCTGATGGCAATTGTTCCGGCAAAGGCAAACGCAGACTTCGGCATGCTGTTTTTCAACTGCGACGGCACGCTTGGCGAGATGTGCGGCAACGGCGCGCGCTGCATCTGCCGCTACGGCTATGAAGCCGGTCTTGCAGGCGAAACGCAGACGATTGAAACGACCGCCGGGCTTGTGACCGGCACGCGCATCGACGCGAAAAACTATCGCATTCGCCTGCCGGACCCGGTGAACCTGCAGTATCTGGCGCTGGATGTGGACGGGAAAAAGGTCGGCTGCATGTATCTGGAGCTGGGAAACCCCGGCATTCCGCATGCGGTGGTGCAGTACCCCGGGCTGCGGGAAGCGGATGAACAGGCGCTGTTCGAGTTCGGGCGCAAGCTCCGGTACCATCCGGCATTCCCAAAGGGCGCCAATGTCAATTTCCTCGAAAAGACCGGCGAAAACCGGTTTTATGAACGGACCTGGGAGCGGGGCGTGGAGGATTTCACCTACGCCTGCGGCACGGGGACGGGCGCGTCGGTCTACGCGCTGGCGGAAAAGCGCCGGTGCGGCGATCATGCGGAGGTCGAAGTGAAAGGGGGCCTTCTCATCGTGGACATTGTCCGCGACGGGAAAAAATGCAGGGACCTGCTGCTCACAGGACCTGCCAGCATGGTCTGCACGGGCGAGATTTTTGACGAGGCGATTTCGCAATAA
PROTEIN sequence
Length: 278
MRFTKMNGAGNDFILVENLHGELTQQQLSKLARTLCDRRMSIGADGLMAIVPAKANADFGMLFFNCDGTLGEMCGNGARCICRYGYEAGLAGETQTIETTAGLVTGTRIDAKNYRIRLPDPVNLQYLALDVDGKKVGCMYLELGNPGIPHAVVQYPGLREADEQALFEFGRKLRYHPAFPKGANVNFLEKTGENRFYERTWERGVEDFTYACGTGTGASVYALAEKRRCGDHAEVEVKGGLLIVDIVRDGKKCRDLLLTGPASMVCTGEIFDEAISQ*