ggKbase home page

L1_008_000M1_scaffold_7514_8

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(3729..4256)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X388_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 179.0
  • Bit_score: 169
  • Evalue 1.60e-39
Sigma-70, region 4 {ECO:0000313|EMBL:ERI98496.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 168
  • Evalue 5.10e-39
Sigma-70, region 4. similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 166
  • Evalue 6.60e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 528
ATGAAAACGATCAATTTGAGAAAATTCTATGGCTCTGTTTATAAAACGGACACATTCATAGAACTGCCCGATGAAATCGTGGATGCGCTGGAAAGCGAAGAACGTATAGAACACTATTCGGGACAAAAAATAAGGGAACACACCTATTCCATCGACTATTCGCCGGAAATAGAATATCACTTTCCGAATCAGGAACCTTCTGCCGAAGAAATTCTTCTGGCAAAAGAGCAGAAAGAACGGATGGTTCTTATGCTGCAATGCCTGCAAGAAGCGCTTGCGACCCTGACCCCAATGCAAAAGCGACGATTAGAAGCGCGTTTTGCAGCGGCAATGAAATATCGAGAAATTGCAGATGAGGAGAACGTCAGCATGACTTCGATTACGACAACGGTCAGGGATTCTGTGTTAAAACTGAGAGATTATTTTATAAAACACGGATGGTTAGAATCTCCAAAGGAGGCAACGGTATGTACGAGAGTAACCCCACGGAAACGAATCAGAAAAAAGACGAGAAGGAACAGATCATGA
PROTEIN sequence
Length: 176
MKTINLRKFYGSVYKTDTFIELPDEIVDALESEERIEHYSGQKIREHTYSIDYSPEIEYHFPNQEPSAEEILLAKEQKERMVLMLQCLQEALATLTPMQKRRLEARFAAAMKYREIADEENVSMTSITTTVRDSVLKLRDYFIKHGWLESPKEATVCTRVTPRKRIRKKTRRNRS*