ggKbase home page

L1_008_000M1_scaffold_7539_1

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 3..2552

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 849.0
  • Bit_score: 1556
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 847.0
  • Bit_score: 811
  • Evalue 1.50e-232
DNA-directed RNA polymerase subunit beta' n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXG8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 849.0
  • Bit_score: 1556
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:170 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2550
CCGCTGTCGGCGGAGGCGCAGGCAGAAGCGCGTATGCTGATGCTCTCGGCAAACAACCTTCTGCGTCCGCAGGACGGCAAGCCCGTCACGGTTCCGACGCAGGATATGATCCTCGGCACCTACTATCTGACCTATCAGCGCTACGACATCGACGCCTTTGAGACGCTGCATGAGATCTTCCCGCTGCTGGACTGCGGCAAGCTCAAGCCCGAAAAGCCCATCTGGGTGAAGAACATCTGGGACGACGCGGATGCGGAAGGCTATCAGATGTATCTGCGCACGAGAGGCGAGCTTCTGCAGAACGAGACCGACCGCCCCGAGACGATTCCGGGCTCTTACCAGACGCTCGAGCAGGCGGTTCAGGCGCTCGACAAGGGCGAAATTGCGGCAGACGACGTGATCTATATCTGGAACGTCTGGGATAAGCCCGCCGATATCAAGGAAGAAAACCACATCTTCGTGCGCACCGTCGGCGCTTACGCCGAGCAGGCGTATCACAACGGCAGCGCCAAGCCGAAGGAATACTTCCACATGTTCCACTCCGAAGACGAGGCAATGATGGCTTACGCCGACGGTCTGATCGACATGCACGACCCGATCAAGGTCTGGAAGGAACTCGAAATTGACGGCGCAAAGCAGCACCGCATCATTGACGCGACCGTCGGCAGACTCATCATCAACGACGCCATTCCGCAGAACCTCGGCTTCAAGAAGCGCGAGACGACAGACGATCTGTTCGGGCTTGAAATCGACTTCGTCGTCGGCAAGAAGCAGCTCGGCAAGATCATCGACAATTGTATCCGCATCAACGGCTTTACCCTGTCTACCGAAATGCTCGACAAGGTCAAGGCGCTCGGCTACAAGTACTCCACCAGAGCTTCCATCACGGTCTCGATTGCCGATATGGAAATCCCGGAGAAGAAGTACGAGCTGATTCACGAGGCAGAAAAAGAGGTCGTCAAGATCGACCGCCAGTTCAAGCGCGGCTTTATCACCAACGACGAACGCTACCGCCTGACGGTTCAGCAGTGGGAAAAATCCATCAAGGACGTCACGGACGCACTGCAGTCGAACCTGAAGCGCTTCAACCCGATCTTCATGATGGCAGACTCCGGCGCTCGAGGCAGCATGAACCAGATCCGTCAGCTTGCCGGTATGCGCGGTCTGATGGCGGATACGAACGGACGCACGATCGAAATCCCGATCAAGGCGAACTTCCGTGAAGGGCTGTCGGCTCTGGAATACTTCATCTCCTCCCGAGGCGCTCGAAAGGGCATGACCGATACCGCGCTTCGTACTGCGGACTCCGGTTATCTGACGCGCCGCATGGTCGATGTGTGCCAGGATGTGATCATCCGCGAATTCGACTGCGGTTCGACGAACGGCAGCTGGAAGGGCGATTACTATGAAAAGGGTCAGCTGATCGACTCCTTTGCAAACCGCATCCGCGGCCGGTACCCGGTGCACGACATTGTCGACCCGCAGACGGGCGAGCTTCTGCACTCGAAGGACGTCATGCTCCGCGAAGACGATGCGAAGAAGTTCCTGGCGCATGGCATCGACAAGGTCTATGTCCGCTCGGTGCTCGGCTGCAAGGCAAGAAGCGGCGTGTGCGCAAAGTGCTACGGCATGAACCTGGCGACCTCCGAGCTGGTGAACCCCGGCGAAGCGGTCGGCATCATTGCCGCGCAGTCCATCGGCGAACCCGGCACGCAGCTGACGATGCGTACCTTCCACACCGGCGGCGTCGCGGGCGACGATATCACGCAGGGTCTTCCCCGAGTCGAAGAACTCTTTGAGGCAAGAAAGCCGAAGAAGATGGCACAGATTTCGGAAATCGACGGCGTGGCAGATGTGGACGATTCCCACAAGACGGCACTTCGAAACATCACCATTACTGCCGACGACGGCGAGGTCAAGCAGTATCAGGTCCCGTATTCCGTGGGTCTGAAGGTCGAGCATGGCAAGCGCGTGAAGAAGGGTGATCCCATCACCGACGGCGCGCTGAACCCGCACGACGTGCTGCGCATCTCGGGCGTCGAGGCTGTGCAGGATTATCTGACGCAGGGTGTTCTGGCGGTTTACCGTCAGCAGGGCGTCGACATCAACGAAAAGCACATCGAGGTCATCATCCGCCAGATGATGCGCAAGGTGCGCGTGGAAGAACCGGGCGACACGAAGCTTCTGAGCGGTACGGTCATCGACATCTACGAGTTTGAAGACGCCAATGCCGAGGTTCAGGCGCGCATCGACGCGGGCGAGACGGATCTCAAGCTTGCTACCGACAGCCTGATTCTCATGGGCATCACGAAGGCTTCGCTGGCAACCGAGTCCTGGCTCTCCGCAGCTTCCTTCCAGGAGACGACGAAGGTTCTGACCGACGCCGCCATCAAGGGCAAGGTCGACCATCTGGTCGGTCTGAAGGAGAACGTTATCATCGGCAAGCTGATTCCTGCCGGTGCAGGTCTGCAGGCATACCGCGACTTCGAGCCCGGCATCACGCCGGAGTCGATCGTTACGGAAGAAATGATTGACGACGAAAAGATGTAA
PROTEIN sequence
Length: 850
PLSAEAQAEARMLMLSANNLLRPQDGKPVTVPTQDMILGTYYLTYQRYDIDAFETLHEIFPLLDCGKLKPEKPIWVKNIWDDADAEGYQMYLRTRGELLQNETDRPETIPGSYQTLEQAVQALDKGEIAADDVIYIWNVWDKPADIKEENHIFVRTVGAYAEQAYHNGSAKPKEYFHMFHSEDEAMMAYADGLIDMHDPIKVWKELEIDGAKQHRIIDATVGRLIINDAIPQNLGFKKRETTDDLFGLEIDFVVGKKQLGKIIDNCIRINGFTLSTEMLDKVKALGYKYSTRASITVSIADMEIPEKKYELIHEAEKEVVKIDRQFKRGFITNDERYRLTVQQWEKSIKDVTDALQSNLKRFNPIFMMADSGARGSMNQIRQLAGMRGLMADTNGRTIEIPIKANFREGLSALEYFISSRGARKGMTDTALRTADSGYLTRRMVDVCQDVIIREFDCGSTNGSWKGDYYEKGQLIDSFANRIRGRYPVHDIVDPQTGELLHSKDVMLREDDAKKFLAHGIDKVYVRSVLGCKARSGVCAKCYGMNLATSELVNPGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKKMAQISEIDGVADVDDSHKTALRNITITADDGEVKQYQVPYSVGLKVEHGKRVKKGDPITDGALNPHDVLRISGVEAVQDYLTQGVLAVYRQQGVDINEKHIEVIIRQMMRKVRVEEPGDTKLLSGTVIDIYEFEDANAEVQARIDAGETDLKLATDSLILMGITKASLATESWLSAASFQETTKVLTDAAIKGKVDHLVGLKENVIIGKLIPAGAGLQAYRDFEPGITPESIVTEEMIDDEKM*