ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_008_000M1_scaffold_7071_6

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(4773..5129)

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J127_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 118.0
  • Bit_score: 219
  • Evalue 1.20e-54
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 118.0
  • Bit_score: 219
  • Evalue 1.70e-54
thioredoxin similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 100.0
  • Bit_score: 100
  • Evalue 1.80e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:124 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGGTAATCAAGGCAATTACAACGGAGAGCTTCCGGGATGATGTGTTGAAAGCGAGAAAGCCGGTTCTGGTGAAATTCTGGGCACCGTGGTGTGGGTATTGCCGCGCTCTCGCCCCGGCGTTGGAGTCAATTGAAAAGCAGTATGAAAGTCTGCTTTCCGTAGGGCGTGTGAACTTCGATACGGAGACGGCGCTGGTGCGCAGGTACAACATTCACGCGCTGCCGACGCTGCTGCTGTTCATCAACGGAGCTGTGGCGGGTTTTCTGATCGACCCTTTCTCTGAGAAGGAAATTGACGCATTTTTAAGAAAAATGCTCGGGCTGAATGCAGGGGGTCTATATGGCAAATATGTATGA
PROTEIN sequence
Length: 119
MVIKAITTESFRDDVLKARKPVLVKFWAPWCGYCRALAPALESIEKQYESLLSVGRVNFDTETALVRRYNIHALPTLLLFINGAVAGFLIDPFSEKEIDAFLRKMLGLNAGGLYGKYV*