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L1_008_000M1_scaffold_1505

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1505_31
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34350..34961)
DNA (612bp) protein (204aa)
SOS regulatory protein LexA (EC:3.4.21.88)
Repressor LexA n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGZ6_9FIRM
Repressor LexA {ECO:0000313|EMBL:EHO31530.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_008_000M1_scaffold_1505_32
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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35675..36502
DNA (828bp) protein (276aa)
ATPases involved in chromosome partitioning n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERZ0_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDE05400.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ATPases involved in chromosome partitioning
L1_008_000M1_scaffold_1505_33
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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36456..37391
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05401.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
parB1; ParB-like partition protein
L1_008_000M1_scaffold_1505_34
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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37572..38210
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8F6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15901.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_1505_35
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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38276..42493
DNA (4218bp) protein (1406aa)
Cna protein B-type domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8F7_9FIRM
Cna protein B-type domain.
Cna protein B-type domain {ECO:0000313|EMBL:CBL15902.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_1505_36
unknown

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42483..42572
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_000M1_scaffold_1505_37
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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42632..43345
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDH8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ51603.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L1_008_000M1_scaffold_1505_38
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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43342..43524
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UBB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77396.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L1_008_000M1_scaffold_1505_39
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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43521..44093
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDH7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ51602.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L1_008_000M1_scaffold_1505_40
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44090..44461
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04797.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L1_008_000M1_scaffold_1505_41
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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44451..44732
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38006.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
DNA methylase
L1_008_000M1_scaffold_1505_42
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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44796..45803
DNA (1008bp) protein (336aa)
DNA-binding helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EMB2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA98269.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L1_008_000M1_scaffold_1505_43
unknown

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45866..46021
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000M1_scaffold_1505_44

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comp(46092..47432)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AQT0_9CLOT
Uncultured bacterium extrachromosomal DNA RGI00083 {ECO:0000313|EMBL:CDL65591.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L1_008_000M1_scaffold_1505_45
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

47622..48107
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VUY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88127.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L1_008_000M1_scaffold_1505_46
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48124..48447
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZHP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46796.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L1_008_000M1_scaffold_1505_47
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48444..49385
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27799.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
topoisomerase
L1_008_000M1_scaffold_1505_48
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

49382..50101
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U5P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77379.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L1_008_000M1_scaffold_1505_49
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50221..50544
DNA (324bp) protein (108aa)
Relaxosome component n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVU6_9CLOT
Relaxosome component {ECO:0000313|EMBL:CDC22591.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
HutU; urocanate hydratase
L1_008_000M1_scaffold_1505_50
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50535..51956
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65766.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Relaxase/Mobilisation nuclease domain.
L1_008_000M1_scaffold_1505_51
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51898..52668
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27793.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1505_52
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52668..52859
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38893.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_1505_53
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52846..53868
DNA (1023bp) protein (341aa)
Type IV secretion system protein VirD4 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M478_9FIRM
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:EOS65770.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Type IV secretory pathway, VirD4 components
Displaying items 31-53 of 53 in total

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