ggKbase home page

L1_008_000M1_scaffold_1505_19

Organism: dasL1_008_000M1_concoct_63_sub_fa

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 23975..24394

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GT14_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 226
  • Evalue 1.50e-56
RNA polymerase sigma factor {ECO:0000313|EMBL:CDB27525.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 226
  • Evalue 2.10e-56
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 124.0
  • Bit_score: 145
  • Evalue 7.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oscillibacter sp. CAG:241 → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGTTATCGGCGGCATTGCTGCTGCTGTCCAACAGCCTGTTTTTGACCCTGCATTTGTCCGGTAATCCCGGCTCCTTTCCCCGTCCCCTGTCCCGGCAGGAGGAGCGGGAGTGCTTGGAGCAGTGGGCCCAGGGCGATCTGTCCGCCCGCAACCGCTTGGTGGAGCACAATCTCCGCCTGGTGGCGCACATCATCAAAAAGTATTATACCCAGGCCAGCAATCAGGAGGACTTGATCTCCATCGGCACCATCGGCCTGATCAAGGCGGTGAACACCTTTCGGCCCGATAAAAAGATCCGCCTGGCAACTTATGCGTCAAGATGTATTGAAAATGCAATACTATCGCAACGGAACAATCGGCAGTTGAGGTGGAAAACCATGAACCTTTTTGGGCAAAATGGTCTATATTCTGCCGCTTGA
PROTEIN sequence
Length: 140
MLSAALLLLSNSLFLTLHLSGNPGSFPRPLSRQEERECLEQWAQGDLSARNRLVEHNLRLVAHIIKKYYTQASNQEDLISIGTIGLIKAVNTFRPDKKIRLATYASRCIENAILSQRNNRQLRWKTMNLFGQNGLYSAA*