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L1_008_000M1_scaffold_997_3

Organism: dasL1_008_000M1_concoct_89_fa

near complete RP 47 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2847..3575)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KI31_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 234.0
  • Bit_score: 315
  • Evalue 2.50e-83
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 244.0
  • Bit_score: 325
  • Evalue 5.80e-86
sigE_2; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 243.0
  • Bit_score: 315
  • Evalue 1.20e-83

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 729
ATGTACCAAAAACTAAAAAAGTACTTAAAACAGCTTTATCTAAACTTTGTTGCAAAAAAGGATGGCAAAGTTTTCTACGTAGGAGGAAGCGACACTCTGCCTCCTCCGCTGAATAAAGAAGATGAACAATGGTGGACATCGAGACTTGGAAATCCTGACTATTCCGACAAGGCAAGACAAATATTAATTGAGCACAATTTGAGATTGGTAGTATATATAGCAAAACGATTTGACAGTACCGGTATAGGTATTGAAGACTTAATCTCAATCGGAACCATCGGACTAATTAAGGCAATAAATACATTTAAGCCAGAAAAAAATATAAAACTCGCTACATATGCTTCAAGATGTATAGAAAATGAAATATTAATGTATTTAAGAAAAAACAATAATAACAGAATAGAAGTATCAATTGACGAACCGCTAAACGTAGATTGGGACGGAAACGAACTTTTACTTTCTGATATATTGGGAACTGATAATGACGTAACCCAAAAAAACATAGAAGACGAAACAGATAGAGAACTGCTTTATCTTGCAATGGAAAAACTTTCAGGCCGAGAAAGAAATATTGTTGAATTAAGATTTGGAATAAACAATAACGGAGATGAAATGACACAAAAAGAAGTAGCAGACCTTCTTGGTATTTCGCAGTCATATATTTCAAGACTTGAAAAAAGAATTATAAAAAGGCTAAGAAAAGATATGAACAAAATGATAAACAGTTAA
PROTEIN sequence
Length: 243
MYQKLKKYLKQLYLNFVAKKDGKVFYVGGSDTLPPPLNKEDEQWWTSRLGNPDYSDKARQILIEHNLRLVVYIAKRFDSTGIGIEDLISIGTIGLIKAINTFKPEKNIKLATYASRCIENEILMYLRKNNNNRIEVSIDEPLNVDWDGNELLLSDILGTDNDVTQKNIEDETDRELLYLAMEKLSGRERNIVELRFGINNNGDEMTQKEVADLLGISQSYISRLEKRIIKRLRKDMNKMINS*