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L1_008_000M1_scaffold_2806_5

Organism: dasL1_008_000M1_concoct_89_fa

near complete RP 47 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(5484..5837)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C25F similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 119.0
  • Bit_score: 144
  • Evalue 3.70e-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 116.0
  • Bit_score: 147
  • Evalue 8.10e-33
RNA polymerase sigma-27/28 subunit,RpsK/SigK similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 119.0
  • Bit_score: 143
  • Evalue 2.40e-32

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Taxonomy

Geomicrobium sp. JCM 19038 → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
ATGCTTGCTTTTATAAATTCTGTACTACAGTCATTAATATTGCTTATATCATATATTTCAAACCACAACTCTTTTCCCAAACCGCTTTCCAAAGAGGAGGAGGCGGAATGCCTGAGACTTATGGCGGAAGGAGACGAGGAGGCAAAAAATAAACTTATTGAACATAACCTGAGACTGGTGGCTCATGTGGCAAAAAAATATTCGTCGTCAACAGCGTGCGCCAGCGACAGCGAAGACTTATTGTCCATAGGAACGATAGGGCTTATCAAGGGAATAAACAGTTTTGACGCCTCAAAAGGCACTAAGCTTGCAACATACGCTGCACGATGTGTTGAAAAACCAATACTCACATAA
PROTEIN sequence
Length: 118
MLAFINSVLQSLILLISYISNHNSFPKPLSKEEEAECLRLMAEGDEEAKNKLIEHNLRLVAHVAKKYSSSTACASDSEDLLSIGTIGLIKGINSFDASKGTKLATYAARCVEKPILT*