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L1_008_000M1_scaffold_1318_23

Organism: dasL1_008_000M1_concoct_89_fa

near complete RP 47 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(25984..28119)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 701.0
  • Bit_score: 863
  • Evalue 3.50e-248
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 701.0
  • Bit_score: 863
  • Evalue 1.80e-247
DNA topoisomerase 1 n=5 Tax=Clostridium thermocellum RepID=A3DCL9_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 701.0
  • Bit_score: 863
  • Evalue 1.20e-247

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2136
ATGGCGGAAAAGAGAAAAACTTCTACAAAAAAAACCAAGTCTTCTGCAAAAAAGAAGAAGCTGGTTATAGTTGAGTCTCCAACAAAAGTTGACAGTGTTAAAAAGTATTTGGGAAGTTCATATAATATAGAGGCAACAATGGGACATTTGCGCGACTTGCCAAAGAGCCAGCTCGGAGTTGATATAGATAATGACTTTGAACCTAGATATATAACTATAAGAGGCAAGGGAGATTTAATAGCAAAATTAAAGAAAAAGGCTAAATCGGCCGAAAAAGTTTATCTTGCAACTGACCCTGACCGAGAGGGAGAAGCCATTTCATGGCATTTGGCAAATATTTTGGATATTGATCCTAAGAGTCCGTGCAGAATAACTTTTAATGAAGTTACAAAGGATGCGGTTAAAGAAGCGGTTAAAGAAGCCAGAGGTATAGATATGGATTTGGTGGACGCTCAACAGACGCGCCGTGTACTTGACAGAATCGTAGGATATCAAATAAGTCCTCTGCTTTGGAAAAAAATAAAAAAAGGTTTAAGCGCCGGACGCGTGCAATCGGTTGTAACTAGAATGATTGTTGACCGCGAACGTGAGATTGACGCATTTGAACCAACAGAATATTGGTCAATAGACGCTAAACTTACAAATGTTAGTGGAAAACTGCCGTTTATTGCAAGGTTTTATGGCTCTAGGGATGGTAAAAAGATTCCGTTGGAAAATGGTGAGGACACTGATAAAATTGTAAAAGAACTCAAAACTTCCGACTATGCTGTGTCCAAAATAATAAAAAAGGAAACAAAGCGTCGTCCTTCACCTCCTTTTACAACCAGTACTATGCAGCAGGAAGCTTCAAGAAAGCTGAATTTTACGGCCAGAAGAACTATGATGGCGGCACAGCAGCTTTACGAGATGGGCTTTATAACTTATATGAGAACTGACTCTTTAAGAATCGCCACAGTGGCTCAAAATGAGGCGCGTTCTTATATTTCACAAAAGTTTGGTGATAAATTTATTCCGTCTGCGCCAAGACAGTATAAGGCTAAAAAATCTGCACAGGACGCACATGAAGCAATACGTCCTACTTATGCGGCTAATTCTCCTGAAAAATATAAAGATACATTTAAACCTGACCAGTTTAAACTTTATAGATTGATTTGGCAGCGTTTTATGGCAAGTCAGATGTCTGACGCAATAATGGATACAGTCAGCGCTGAAATAACCACTGATAAGTATATGTTAAAAGCCAGCGGAAGCACTGTTAAATTTGCCGGTTTTACTACTCTGTATGTTGAAGGCAAGGATACTGAAGAGGAAAAAGCAAAAAAACTGCCGGTTTTGACAGAGGGACAGGAATTAAAACTTTCTGAACTTAAGCCGGAACAACATTTCACCCAGCCGCCGCCTCGATATACGGAGGCGTCTATTGTAAAAGCAATGGAGGAAGAAGGCATTGGTCGTCCGAGTACTTATGCTCCAACAATTGCTACGATTACTGCTAGAGGTTATGTTGCTAGGGAAAAAAAGACGCTGTTTCCGACAGAACTTGGATATATAGTGACTGATTTGATGAAAGAAAATTTTAAGGATATAGTTAATACTAAATTTACGGCTAATATGGAAGACAAAATAGAGGATGTCGCCGACGGCTCTACCAACTGGAAAGAAGTTATAAGAGATTTTTATGATCCGTTTGAAAAGACTCTTAAAGAAGCAGAAGAAAAAATAGGCGATATTGAGTTAAAAGATGAGGAATCTGACGTAGTATGCGAGAAGTGCGGCAGAAAAATGGTGTATAAACAAGGTAAGTTTGGAAAATTTTTAGCATGTCCCGGTTTTCCTGAATGTAGAAATACTAAGGCGATAACTGTTGAACTTGGAGTTCCGTGTCCCAAATGCGGCGGTAAGGTTTTGATACGCAAGTCTAAAAAGGGGGCGACATTTTATGCTTGTGAGCATTCGCCCGAGTGTGATTTTATTTCCTGGGATGAGCCTAGTGATGAAAAGTGTCCAAAATGCGGAAGCATACTTATGAAAAAACACGCGTTCAGAAAAAATGGACCTTTGAGCTTTGTATGTTATAATGAGGACTGTGACTATGTCAGAAAGCCGGAGTCTAAAAAAAAGAAATCTGAGAAATAA
PROTEIN sequence
Length: 712
MAEKRKTSTKKTKSSAKKKKLVIVESPTKVDSVKKYLGSSYNIEATMGHLRDLPKSQLGVDIDNDFEPRYITIRGKGDLIAKLKKKAKSAEKVYLATDPDREGEAISWHLANILDIDPKSPCRITFNEVTKDAVKEAVKEARGIDMDLVDAQQTRRVLDRIVGYQISPLLWKKIKKGLSAGRVQSVVTRMIVDREREIDAFEPTEYWSIDAKLTNVSGKLPFIARFYGSRDGKKIPLENGEDTDKIVKELKTSDYAVSKIIKKETKRRPSPPFTTSTMQQEASRKLNFTARRTMMAAQQLYEMGFITYMRTDSLRIATVAQNEARSYISQKFGDKFIPSAPRQYKAKKSAQDAHEAIRPTYAANSPEKYKDTFKPDQFKLYRLIWQRFMASQMSDAIMDTVSAEITTDKYMLKASGSTVKFAGFTTLYVEGKDTEEEKAKKLPVLTEGQELKLSELKPEQHFTQPPPRYTEASIVKAMEEEGIGRPSTYAPTIATITARGYVAREKKTLFPTELGYIVTDLMKENFKDIVNTKFTANMEDKIEDVADGSTNWKEVIRDFYDPFEKTLKEAEEKIGDIELKDEESDVVCEKCGRKMVYKQGKFGKFLACPGFPECRNTKAITVELGVPCPKCGGKVLIRKSKKGATFYACEHSPECDFISWDEPSDEKCPKCGSILMKKHAFRKNGPLSFVCYNEDCDYVRKPESKKKKSEK*