ggKbase home page

L1_008_000M1_scaffold_1275_2

Organism: dasL1_008_000M1_concoct_91_fa

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(823..2304)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI0003739EFD similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 506.0
  • Bit_score: 132
  • Evalue 1.10e-27
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 484.0
  • Bit_score: 132
  • Evalue 3.00e-28
Uncharacterized protein {ECO:0000313|EMBL:AEB56574.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 484.0
  • Bit_score: 132
  • Evalue 1.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
ATGTCCTCCAGCCGCCGACCTTCCTTCTTCCATCTGTCCACATGGCTTCCGCTCCCGGCTCTGGCCCTGGCCGCGCTGCTGGCGGCCCTGCCCGTCCATGCCGCCACGGGGGAGCAGAAATTGACGCCACGGGATTTCAGCACCCTGATTCCCATTGAAACCAAGGGCAACGCCCCGGTCTACCGGCTTGATCTGCCCTTTTCCGTCTATGAGCGTTCCCGCCTGTCTCCCCTGCGCGACGTGCGTGTTTTCAACAGCTTGGGGCAGGCCGAAGCCATCTACATCAACGCCGCCGAATCTCTGCCGGAACCGGGGCGGGAACACGCATTCCCCTGTTTCAGCCTAAGGGTGCGCGTCAGCCCGGATGGCGTCGCCCTGCTGCGCGACGGCCGGGACGCGCCCGCCTCCGGGCCGGGACGCGACAAAAACGAAGCGTACGAAACCCGTGGCCTGCTGGTGGATTTCGACCAGAAGCGCCCGCGCTTCGATCGCGTACGGCTGGTGCCGGGAGAGACACTTTCCAACAGTGCGGCGGGACCGGACGGCCAGCACGGCTCCATGCTCAGCACCCGGCTCTATGTCAGCCGGGATCTGCAACACTGGTCTCTGGCGGCGCGTCCCTCCCTGGGCCGCCTGCGCGTGGACGGGCAGAGCCTGGAAATGCTGGAGCTGCCCGTCGGAGAGCTTGATCAACGTTACATGCTGCTTGTGCCCGCCGCCGGGAGCGAACTTTTTCCGGTGCGGGAACTCCTCGCGCGCGAGAAAGCCAAAAGCGCAACGTCGGTCCAGAGCGTCCGCCTGCACGGCCGCAAGGACGACAAGGCCGGAGGCTTCGGCTACGCTGTTCCGCGCGGCCTGCCCGTGCTCAACCTGGAGCCCGAGCTGGACTCGGACAATGTTCTGCTGCGCGGCCGCATTCTGACTCCGGCTCTGCCCGAGAGAGGCAACGCGCGGCATCGGGTCGCCCGGCGGCAGAATGAAACGGAACTGGTCTGGGAAGAACGCGCGCCTCTTTTTTACTATCGGCTGGGCGGCAACGGCCGGGACTTCCGGCACAGCGACCCGGTTCCGTTCGACCGGGACTGGCTGGGACCGGAGAACAACGCTCCCCTGCTGCGTGACGCGCCGTTCACCCTGCTGTTGCGCCTGCGGGGCGACAGGGCGGAAGCCCCGGCCTTGCTGGTGCGCTGGGCGCGCCAGCAACTCTATTTCATGGCCGAAGGGCCCGGGCCCTACATCCTGGCCGTGGGCAGTCTCAAGGCGGAGGAAGCCGCCGACACGCGGGACGCCGCCCTGCGCGAACTGCCCGTGCAGGCCGCGCCCGCAAGACTGGAAATGGACAAGCTGCATGCGCAGACGCCGCCCACGGCTTATGCCGAAACCTCCGGCGGCCAGCGCCTGCTGCTCTGGGGCGTGCTGTTGCTCGGAGCCGCCTGCATGGCCTTCATGGCCGTGCAGTTGCTGCGCAAGCCCAAGGAATAG
PROTEIN sequence
Length: 494
MSSSRRPSFFHLSTWLPLPALALAALLAALPVHAATGEQKLTPRDFSTLIPIETKGNAPVYRLDLPFSVYERSRLSPLRDVRVFNSLGQAEAIYINAAESLPEPGREHAFPCFSLRVRVSPDGVALLRDGRDAPASGPGRDKNEAYETRGLLVDFDQKRPRFDRVRLVPGETLSNSAAGPDGQHGSMLSTRLYVSRDLQHWSLAARPSLGRLRVDGQSLEMLELPVGELDQRYMLLVPAAGSELFPVRELLAREKAKSATSVQSVRLHGRKDDKAGGFGYAVPRGLPVLNLEPELDSDNVLLRGRILTPALPERGNARHRVARRQNETELVWEERAPLFYYRLGGNGRDFRHSDPVPFDRDWLGPENNAPLLRDAPFTLLLRLRGDRAEAPALLVRWARQQLYFMAEGPGPYILAVGSLKAEEAADTRDAALRELPVQAAPARLEMDKLHAQTPPTAYAETSGGQRLLLWGVLLLGAACMAFMAVQLLRKPKE*