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L1_008_000M1_scaffold_4304_5

Organism: dasL1_008_000M1_maxbin2_maxbin_110_fasta_sub_fa

partial RP 28 / 55 MC: 2 BSCG 32 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3493..5172)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 594.0
  • Bit_score: 566
  • Evalue 2.70e-158
Transcription termination factor Rho n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VM92_CLOSH similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 594.0
  • Bit_score: 566
  • Evalue 1.90e-158
rho; Rho similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 594.0
  • Bit_score: 566
  • Evalue 5.40e-159

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Taxonomy

[Clostridium] stercorarium → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1680
ATGAACATTCAGGAATTGGGCGGAATGAAACTGCCCGAACTTAAGGCGGCGGCAAAACAGCTTAAAATAAAAGGTATTTCAACACTAAAGAAACAAGAGCTGATTGATGTTATTTCCGCAAAGCTTTCAGAGGATAATTCAGAATCAAAAACATATAATAAAACAAGAAAAAGTGCGCCCGAAAAGGCGCAAAAGCCTCAAAAAACAGAAAATAGGGAAAAATCGGAAAAAGACGATACAAGTGCGGCAGAGGACAGCGCGCCGAAAACTTTTGAAAACGGCGGCTATGGCAATGACAAAAACGGCTATCAGAGAACTCGGCGTACATATAACCGACAGCCGCGTGAGAATAAAATTCTTTCAAATGATAAAACTATTAAAAATGAAGAAAGGTTTGTTTCCGAAAGAAATTACGGCGGAATGAGCAATCCGAATTCAGACGGCGGCGAACAGATTCAGCCGCACAGAACGGAACGCAAAAGCGAGTATGTTCCGCATTCCGCGCCGTCACCGACGCCCGAGGTTGAATACAGCGACCCGGTAAGAAAGACAAACCTTATGAGCGGCGTTTTGGAAATTATGGCTGACGGATACGGTTTTTTGCGCAGCAACAATTATCAGTCGGGAGAAAACGATGTGTATGTATCACAGAACCTGATACGGCGGTTCAACCTTAAAACGGGCGATTTTATCATCGGAAATACAAGAATGCAGCACGAGGGCGAACGCTATGAGGCGCTTTTGTATGTGCAAAAGGTGAACGGGGATTCAATAGACGTTGCAATACACAGAAAGCCGTTTGACGAGCTGACGCCCATATACCCAAACGAGAGATTAAAACTCGAAACGGGCGGCATAGATTATGCGATGCGCTTAATCGACCTTATTGCACCGATAGGTAAGGGCCAGAGAGGAATAATCGTTGCACCGCCGAAAGCGGGAAAGACGACCCTTTTAAAGAGTCTTGCCAACAGCATTTCAAAGAACAATCCCGATGCACAGCTTATCGTGCTTTTGATAGACGAACGCCCCGAGGAAGTAACGGATATGCAGCGCAGCATCAACGGCGATGTTATATACTCAACGTTTGACGAAGAACCGCAAAACCACGCCAAAGTTGCCGAAATAGTTTTGGAACGCGCAAAAAGATTGGTTGAGCATAAAAAAGATGTTGTTATTTTGCTCGACAGCATTACGCGCCTGTCGAGAGCGTATAACCTGGTTATTTCACCGACGGGAAGAACCCTGTCGGGCGGTCTTGACCCCGGTGCGCTCTATCGTCCGAAAAGATTTTTCGGCGCGGCGAGAAATATAGAAGAGGGCGGAAGCCTTACCATTCTCGCAACAGCCTTAATCGAAACGGGAAGCCGTATGGACGATGTTATATTTGAGGAATTTAAGGGAACGGGCAATATGGAGGTTCATCTCGACCGCAGGTTGCAGGAAAAGAGAATCTTCCCGGCGATTGATATTTCGAAATCGGGAACGAGAAAAGAAGAACTGTTGTTGTCACAGCCCGAGCTTGAAACGATGTGGAGAATACGCCGTGCTTATGCGGACAGAAATTCCGCTGAGGTAACGGAGAATATTATACACTGGCTTACACGGACAAAAAATAATGCGGAGTTTATAGAAAACGCAGGAAAGGTATTCGGTGATTATGAAAAGAAATTTTATTAA
PROTEIN sequence
Length: 560
MNIQELGGMKLPELKAAAKQLKIKGISTLKKQELIDVISAKLSEDNSESKTYNKTRKSAPEKAQKPQKTENREKSEKDDTSAAEDSAPKTFENGGYGNDKNGYQRTRRTYNRQPRENKILSNDKTIKNEERFVSERNYGGMSNPNSDGGEQIQPHRTERKSEYVPHSAPSPTPEVEYSDPVRKTNLMSGVLEIMADGYGFLRSNNYQSGENDVYVSQNLIRRFNLKTGDFIIGNTRMQHEGERYEALLYVQKVNGDSIDVAIHRKPFDELTPIYPNERLKLETGGIDYAMRLIDLIAPIGKGQRGIIVAPPKAGKTTLLKSLANSISKNNPDAQLIVLLIDERPEEVTDMQRSINGDVIYSTFDEEPQNHAKVAEIVLERAKRLVEHKKDVVILLDSITRLSRAYNLVISPTGRTLSGGLDPGALYRPKRFFGAARNIEEGGSLTILATALIETGSRMDDVIFEEFKGTGNMEVHLDRRLQEKRIFPAIDISKSGTRKEELLLSQPELETMWRIRRAYADRNSAEVTENIIHWLTRTKNNAEFIENAGKVFGDYEKKFY*