ggKbase home page

L1_008_000M1_scaffold_4304_8

Organism: dasL1_008_000M1_maxbin2_maxbin_110_fasta_sub_fa

partial RP 28 / 55 MC: 2 BSCG 32 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(7149..7883)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 244.0
  • Bit_score: 260
  • Evalue 4.70e-67
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 244.0
  • Bit_score: 260
  • Evalue 1.40e-66
tRNA pseudouridine synthase A n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CPX3_THEYO similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 244.0
  • Bit_score: 260
  • Evalue 9.70e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
ATGAAGAACATAGCGATGCGGCTGATGTATGACGGAACGGCATATCACGGATGGCAATATCAGAATAACGCCGTGACGGTTCAGCAAACAATAGAAGACGCACTTGAAAAACTCTTAAAAAAGCCGACAAAGGTTACGGGGTGCAGCAGGACGGACTCGGGGGTTCACGCCTTGGATTATGTTATGAATTTTCATACCGATACGGGTATTCCGACCGAAAAGCTGCCTTATGCGCTCAATTATCTGCTAAACCGTGACATTGCCGCGACCGAGGTGTGGGAAGTTCCCGAGAATTTTAATGCGAGATTTTCGTCAAAGGGCAAGAGATACGAATATAAAATATGGAACAGCAAAATGCGGAATCCTTTCTGCGGCGGTTATAGCTGGTATGTGCCATACAGACTTGATTTGGACGCAATGCGCCGCTCCGCAAAACATTTCGAGGGCAAGCACGATTTTTCGGCGTTTATGGCATCGGGCGGCAGCCAAAAAACAACCGTGCGGACAATTCGCGTCTGTCGGGTTGAATCGGATGAAAATATGATAACCGTAACGGTTGAGGCAGACGCTTTTCTTTATAATATGGTGAGGATTATAACAGGCACGCTGGCGGAAGTGGGATTCGGAAAGATTATGCCCGATGAGATACCGCGGATAATCGATTCGTGCGAGCGTTCGATGAGCGGACTTACCGCGCCGCCCGAGGGTTTGTTTTTAAAAAAGGTATATTATTGA
PROTEIN sequence
Length: 245
MKNIAMRLMYDGTAYHGWQYQNNAVTVQQTIEDALEKLLKKPTKVTGCSRTDSGVHALDYVMNFHTDTGIPTEKLPYALNYLLNRDIAATEVWEVPENFNARFSSKGKRYEYKIWNSKMRNPFCGGYSWYVPYRLDLDAMRRSAKHFEGKHDFSAFMASGGSQKTTVRTIRVCRVESDENMITVTVEADAFLYNMVRIITGTLAEVGFGKIMPDEIPRIIDSCERSMSGLTAPPEGLFLKKVYY*